| New model in OGS2.0 | DPOGS208731 |
|---|---|
| Genomic Position | scaffold661:+ 15445-20826 |
| See gene structure | |
| CDS Length | 4434 |
| Paired RNAseq reads | 1269 |
| Single RNAseq reads | 2831 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003396 (0.0) |
| Best Drosophila hit | DNA polymerase alpha 180kD (0.0) |
| Best Human hit | DNA polymerase alpha catalytic subunit (0.0) |
| Best NR hit (blastp) | DNA polymerase alpha catalytic subunit, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | DNA polymerase alpha catalytic subunit, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0005658 alpha DNA polymerase:primase complex GO:0003887 DNA-directed DNA polymerase activity GO:0006260 DNA replication GO:0005634 nucleus GO:0006271 DNA strand elongation involved in DNA replication GO:0008296 3'-5'-exodeoxyribonuclease activity GO:0003677 DNA binding GO:0000166 nucleotide binding GO:0001882 nucleoside binding |
| InterPro families | IPR004578 DNA-directed DNA polymerase, family B, pol2 IPR017964 DNA-directed DNA polymerase, family B, conserved site IPR012337 Ribonuclease H-like IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain IPR015088 Zinc finger, DNA-directed DNA polymerase, family B, alpha IPR006172 DNA-directed DNA polymerase, family B IPR023211 DNA polymerase, palm domain |
| Orthology group | MCL12534 |
Nucleotide sequence:
ATGGCAGAGTCCTTAGCGACTTCCAGGGCCAAACGGCAAAAAGTTGACAAAACTGGTCGT
TTGTCGGCTTTAGAAAAATTAAAACAACTAAAGGGGAAAGGCTCTAAACATAAATACGAT
GTGGATGAATTGGAGAATGTGTATGACTTAGTTGATGAGTCTGAATATAGTAATCGGGTA
CTACAGCGACAAGAAGACGACTGGATTGAAGATGATGGGACAGGATATGTGGAGGATGGT
CGAGAAATATTTGATGATGATGAGATTGATGATACTTATGTGGCAAAAGATAACAAAGAA
ACAGGCAGAGGCCACAAAAGGAAAGCTAAGGTTGCTCCCCAGCCGGCTGGGAAAGGAAAT
ATAAGAAATCTCATAGGTGCTATGCCAAATAAAAAGAAAGAGGATGCCAAAATATCAGAT
GACAATATTTTATCAGATATCATGTCAGATTTAGATGGTACTACATCATCTATAGCAAAG
CAAAAGCTTGTTGTTCCGAAAAAAAACATAGTTGACTCAAGTAAGAGAGACGCCCAGAAT
TATTTTAAAAATTTGTCATCGTCTGTTAAAAAACCGACACCACCTGTAAAAAAGGAAGAA
ACTGTTGTTGTGGATGTTGATAATGTTGCTGAAGATAACATTAAGCCACCAGTGATTGAT
CAGGAAAAGCCAAAGAAATCTACATGGTTAATAGACAAAGAAATAAAAAAAGAAGTAGAA
GAGTCTCCTAGTCAAATTATAGAAGAATTTGCAACTCAAGATATAGACTTTGGTGACGAT
TTCAGCAATGATGCGGAACTACCACAAGTTCCTATTAAAAAAGAAGCTACAATGACTGAC
ATATTACAAGATGTCGCTGAAGATTTTAAAGAAGATTTTGATATATTTTCAGTAAAGACA
GAGCCCAAAGAATTGAAGGCCTTATCAAGTAATTGGTCCCAGAATGATAATCAAGTTGTT
GTCAACATACAGAGTGATGTACAGTTGCCTTTACAGAAGAATAAGGATGGGGACCAAGTG
TTGAAGTTTTATTGGCTCGATGCTTGGGAAGATAAATATGTTAAGCCGGGAGTTGTGTAT
TTGTTTGGAAAAGTATATGTTAATCCATCCAAGAAGAAAGAGGGTTGTGCTTCATGCTGC
TTAGTGGTGAAAAATGTCAACCGACAATTGTTTCTTCTTCCAAGAGAATATAAATTAGAT
CCCATAACCTTGGAGGCGACAGATCAAGAGGTAACCATGATGGATGTTTATGAAGAATTC
AACAACTGTGTTGCTAGTGAAATCGGTTTAAAAGAATTCAAGTCAAGGAAAGTTACTAAA
AACTATTGCTTCAATTTACCAGACATACCCTCCCAATGTGATTACTTGGAGGTCAAGTAT
TCGGCTACTTTTCCAATACCACCAGTAGGAAAGAAATATTTGACATTTTCACATATATTT
GGTACCAACACATCTTCTCTAGAGAGCTTCCTGCTTGATAGGAAGATCAAGGGTCCATGT
TGGTTGGAGGTGAAAAATGCTGAGAGTGTTCAAGCCAAAGTGTCTTGGTGCAAATTAGAA
GCATCATGTGATAAAATGGAGAATGTGGCCGTCATAAGAAATGACAGTGATTTAGAACCA
CCTCCTATTGTTATTGCTACTTTAAATATGAGGACAGTTAGTGATCCAAAAACAAGTAAG
ACAAAAATCTTGATGATGAGTTGTCTAGCTCACAACTCTTTCCCTATACACAAGCCGCCA
CCGAATCCACCTTTCCATCAACACTTTTGTGTGATGACAAAATGCAATGACATGTGGCCA
ATTGATTTGAAACAGCAAATGCAACAATATAGAGCGACAAAATTAACGAAATGTGACAAC
GAGAGGGAGCTCCTCAACTACTTCATGGTACAGTTTTGGAAGCTTGATCCGGATTTAGTT
GTTGGTCATGACTTGCAAGGATTCCAGCAGGATTTGCTCATAGGCAACATATTAGACCTG
CGTATTCCGAACTGGTCTCGACTCGGTCGCTTAAAGAGATCAGTGGCTCCGCAAAAAAAA
TTCGCAGCGAGAAGTGCTTTTCTTGGGAGACTAGTCTGCGATATAAAACTATCTGCGATG
GAACTTATAAGGGCACGGAGCTTCGATCTAGATTCTCTGTGTGTTAGTGTTCTGAAAATG
AAAGAAGGGGAGAGAATTGACGTATCGATCGAAGACTTGCCCCGATATAATGAAAGTTCA
AGTGACCTTTTACAATTAGTGTCACTAAGTATGCAGGATGCTTCATACATTCTGAAGATA
ATGTGCGAACTCAATGTGATACCACTGGCTCTGCAAATAACGCAAATAGCGGGCAATATA
ATGTCCAGAACTTTGATGGGCGGACGGTCGGAAAGGAATGAGTTTTTGTTACTGCACGCT
TTCACTGAAAAGAACTACATTGTGCCTGATAAAATATATGGAAAGAAGGCCGACGGTGAC
GATGACGAGCAGGACGAAGCCGGAAATGTATCAAAGAAACAAGCTAAGAAGAAAGCGGCG
TACGCTGGAGGCCTGGTGCTCGACCCCAAGAAAGGCTTCTACGATAAACTCATACTTCTA
ATGGACTTCAACTCGTTATATCCAAGTATCATTCAAGAATATAATATTTGTTTCACGACG
ATCAAAAGAAAGAACGGCGCTTCATCAGATGATGACATCAATAACCTGGTTCTGCCCGCT
CCCAATACGGAATTCGGAGTACTGCCCACACAGATAAGAAAACTAGTTGAAAGCAGACGG
GAAGTAAAAAGACTAATGAAATCACCGGACCTTGCTTCCGAACTGTACATGCAATACAAT
ATTCGGCAAATGGCGTTGAAGCTCACTGCAAACTCTATGTATGGCTGTCTCGGCTTTACA
CATTCTAGGTTCTATGCAAAACCTTTAGCTGCTTTAGTCACTATGAAGGGTAGAGAGATT
CTCATGGACACCAAGGAAATTGTTCAGAAACTAAATTATGAAGTGGTCTACGGTGATACC
GACAGTTTGATGATCAACACCAACTGTTTGGACTACGATTACGTGTTTAAGATAGGCAAC
GACTTGAAAAGAGAAATCAATAAGAAGTACAAACAGATCGAATTAGATATTGATGGAGTA
TTTAAATATCTACTTCTCTTAAAGAAGAAGAAATATGCTGCTGTAGTGGTCAGTAAGAGC
AAAAGTGGTGAATTCATTTATAACCAAGAGCACAAAGGCTTAGATATAGTCAGGAGAGAT
TGGTCGCAGTTAGCCGCAGAGGCCGGAAAATTTATCCTAACGCAAATTCTTTCCGAGCAG
ACGGCTGACGAAAGACTAGAAAGTATACAGAATCATTTAAACAAATTGAAAGAAGATTTA
GTTAACAGCAAAATGCCTTTATCGCTATTGACAATAACTAAGCAATTAACCAAAAATCCT
AACGAATACGCAGATAAGAACAACCAGCCGCACGTCCAGGTAGCTCTGAGATTGAACAGC
AAAAATAGCAGACGTTTTAAAAAGGGCGACATAGTTCCGTATATAATCTGTGAGGACGGC
ACAGCGAATAGTGCGACGCAGAGAGCTTATCATATAGAAGAATTGAAAAATTCCGAACAT
CTTAGCGTCGACTACAAATATTACTTGGCCCATCAATTACACCCCGTCATATCTCGTATA
TGCGAACCCATCGAGGGTTTGGATCCGGCTCGAGTAGCGGACTGCCTCGGCCTGGATCCC
TCCGGCTACCGTCAGATAACAAAGAAAGAAATCTCCAATACAGATACATACGAAGTAGAG
AACGATAAAGAAAAATACAGATATTGCAAAGAATTCACGTTCATATGTGTCAACGAGCAA
TGTAGAACTGAGAACAGAATACGAGACACGTTCAGGCAGGTGGAGAAGGAGAGCGTCACG
TTCCTGGAGCGGTGTCAGAACGAGAAGTGCGCTGTTAAACCTATCGACTACTTAGCGTGT
ATACAGAATCAGCTGTCGTTACAAATGCGCCAGTATCACAGCGAGTATTATACAGGGTGG
TTGGCGTGCGAGGACCCCGCGTGCGGGTACCGCTCGCCGCGACTGCCGCAGACCTTCGCC
GCAGGATATCCGCTCTGCAGGCTGTGCGAGAAAGGCGTCATGTTCCGGGAGTACACGGAG
AAAGACCTGTATTTACAAATAAACTTCTTTTTGTTTCTGTTTGATGTTAACAAGCATAAT
ACGACAAAAACAAAAATAAGCCCTAATATTTTGTCAGCCTTCCAAGTCTTGAAAGTGATG
GTTGAAGAGGTCCTTGCGAACTCGGCGTACGCTATTATAAACTTGTCAAAATTGTTCAGA
TTTTTTGGTGTCGATAACAGAGGCGGGAATAATATTAAGTCTGAAGATCTCGAAATCGAC
ATTCTTCCAGAGACAGAACACATAGACGCCCTACTGGAATTGGGGACTTACTGA
Protein sequence:
MAESLATSRAKRQKVDKTGRLSALEKLKQLKGKGSKHKYDVDELENVYDLVDESEYSNRV
LQRQEDDWIEDDGTGYVEDGREIFDDDEIDDTYVAKDNKETGRGHKRKAKVAPQPAGKGN
IRNLIGAMPNKKKEDAKISDDNILSDIMSDLDGTTSSIAKQKLVVPKKNIVDSSKRDAQN
YFKNLSSSVKKPTPPVKKEETVVVDVDNVAEDNIKPPVIDQEKPKKSTWLIDKEIKKEVE
ESPSQIIEEFATQDIDFGDDFSNDAELPQVPIKKEATMTDILQDVAEDFKEDFDIFSVKT
EPKELKALSSNWSQNDNQVVVNIQSDVQLPLQKNKDGDQVLKFYWLDAWEDKYVKPGVVY
LFGKVYVNPSKKKEGCASCCLVVKNVNRQLFLLPREYKLDPITLEATDQEVTMMDVYEEF
NNCVASEIGLKEFKSRKVTKNYCFNLPDIPSQCDYLEVKYSATFPIPPVGKKYLTFSHIF
GTNTSSLESFLLDRKIKGPCWLEVKNAESVQAKVSWCKLEASCDKMENVAVIRNDSDLEP
PPIVIATLNMRTVSDPKTSKTKILMMSCLAHNSFPIHKPPPNPPFHQHFCVMTKCNDMWP
IDLKQQMQQYRATKLTKCDNERELLNYFMVQFWKLDPDLVVGHDLQGFQQDLLIGNILDL
RIPNWSRLGRLKRSVAPQKKFAARSAFLGRLVCDIKLSAMELIRARSFDLDSLCVSVLKM
KEGERIDVSIEDLPRYNESSSDLLQLVSLSMQDASYILKIMCELNVIPLALQITQIAGNI
MSRTLMGGRSERNEFLLLHAFTEKNYIVPDKIYGKKADGDDDEQDEAGNVSKKQAKKKAA
YAGGLVLDPKKGFYDKLILLMDFNSLYPSIIQEYNICFTTIKRKNGASSDDDINNLVLPA
PNTEFGVLPTQIRKLVESRREVKRLMKSPDLASELYMQYNIRQMALKLTANSMYGCLGFT
HSRFYAKPLAALVTMKGREILMDTKEIVQKLNYEVVYGDTDSLMINTNCLDYDYVFKIGN
DLKREINKKYKQIELDIDGVFKYLLLLKKKKYAAVVVSKSKSGEFIYNQEHKGLDIVRRD
WSQLAAEAGKFILTQILSEQTADERLESIQNHLNKLKEDLVNSKMPLSLLTITKQLTKNP
NEYADKNNQPHVQVALRLNSKNSRRFKKGDIVPYIICEDGTANSATQRAYHIEELKNSEH
LSVDYKYYLAHQLHPVISRICEPIEGLDPARVADCLGLDPSGYRQITKKEISNTDTYEVE
NDKEKYRYCKEFTFICVNEQCRTENRIRDTFRQVEKESVTFLERCQNEKCAVKPIDYLAC
IQNQLSLQMRQYHSEYYTGWLACEDPACGYRSPRLPQTFAAGYPLCRLCEKGVMFREYTE
KDLYLQINFFLFLFDVNKHNTTKTKISPNILSAFQVLKVMVEEVLANSAYAIINLSKLFR
FFGVDNRGGNNIKSEDLEIDILPETEHIDALLELGTY