New model in OGS2.0 | DPOGS208734  |
---|---|
Genomic Position | scaffold661:+ 46006-57023 |
See gene structure | |
CDS Length | 1806 |
Paired RNAseq reads   | 4255 |
Single RNAseq reads   | 10781 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003399 (4e-14) |
Best Drosophila hit   | pumilio, isoform B (2e-16) |
Best Human hit | pumilio homolog 2 (6e-11) |
Best NR hit (blastp)   | PREDICTED: similar to pumilio CG9755-PA, isoform A [Apis mellifera] (2e-32) |
Best NR hit (blastx)   | PREDICTED: similar to pumilio CG9755-PA, isoform A [Apis mellifera] (3e-28) |
GeneOntology terms    | GO:0048477 oogenesis GO:0007280 pole cell migration GO:0005737 cytoplasm GO:0042078 germ-line stem cell division GO:0003730 mRNA 3'-UTR binding GO:0017148 negative regulation of translation GO:0007281 germ cell development GO:0001709 cell fate determination GO:0045727 positive regulation of translation GO:0005515 protein binding GO:0008258 head involution GO:0007268 synaptic transmission GO:0008595 anterior/posterior axis specification, embryo GO:0007067 mitosis GO:0045786 negative regulation of cell cycle GO:0003729 mRNA binding GO:0016477 cell migration GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0000900 translation repressor activity, nucleic acid binding GO:0045892 negative regulation of transcription, DNA-dependent GO:0007616 long-term memory GO:0048813 dendrite morphogenesis GO:0050804 regulation of synaptic transmission GO:0008582 regulation of synaptic growth at neuromuscular junction |
InterPro families   | ND |
Orthology group | MCL18922 |
Nucleotide sequence:
ATGAAGTGGCCGGGTACTGGCGGAGAGGAAGAGGCGGGCGAAGCTGGTCTGCAGACAGCG
CGAGTATCGCAAAGTCGTGCCCAGGACGACGCCGCAGTACATTATGTGTTCCAGCGCGAG
AATCAAGAAGCTGATTTGTCTACACTAGCTCCTAAACAGCGCTGGGCGGTTTGCGAGGAT
TCAATAGCAGAGAATCAAGATAAATGGAAGAATCATACTCCTATAACAATGAATAACATA
CAGCATCAAGGTCATATACAGTTAAAGAATTCACAAACCAATCAACAATATATTAACCAG
GCAATAGCATCCTCGGTGGGCACACTAGCTATAAACCCGTCTGTGATTGGAAGCCATCCG
GCACATTTGACTACAAACATGGTCCATACCCAATTGGCTCCATTACAAAACCACACATTG
GGTAACAATTTGGCCATACAGAACAGCATGATGCTGCAACCTCTTCAAGGAATGCAGAAT
GCTCCTCAAATGGGACAGCAAGGTTTATATGATATTCATCAACACCCAGCCACTCCCATG
CAAGCTCCAATGAATGGCATGGGCAAGAGTGCTGAGCACCTCATGTATCTAAGTCAGGCT
GGGATGCTTGCTCCGGGAACAAATCAATTTCTACAACAAGGACAGAATCAACTTGGGCTT
ACACCAGTCGCTGCAATCAGAAATCAGATTGCACCATCTGCAAAAAAGTTGTGGGACAAA
GGACCTGGAGCTGGAGGTGATATCAAAGGACCACCACATTTACCACCCTTGCAGCTGAAC
CCTGAACAGATGTGGCGAGACCCCACTTGGTCTGCTCAAGCAGTGGAACACAATGTGGGT
GTACCGATGATGGGCACTCGTCGTGGGGTAGCGTTTCCTGGCGGGGACGCCAGCAGCATC
CTCTCGCCGAGAGACACCGCCGGCCTGGGGGTCAAGATGGTGGAGTACGTGCTGAGAGGC
TCCCCAACGGAGGGTGGCGTGGCGGGGGCAGTGGCGGGCGGCGGAGATAAGGTGGCGGGC
GTGGTGGCGGGCCTGCGAGGCATGGTGCTGGACGAGCGCTCAGAGGACAAGCCGGCCGCC
GCCTCGCCCTTCGACAAGGACCTGCACGAGCTGCACGACCACGCCGCGCTGCAGAACGGA
CTGCACAACGGCCAGGACGACGACAAGGCCTTCAATCGCACCCCTGGCTCCCGGCAGCCG
TCTCCCGCTGAGGAGGAGGGTGGTGTGGGCGGCATGAACAACGTGGGCACTGGCGGGGTG
AACGCGGGCGGCGTGGGCGTCGGGGTAGGTGTGGGCGTTCGCAACGGCGAGGCGGGCGCC
TTCCCACTGCTGCCGCACGCGCTGCCCGCGCCACAGCCGCAGCTGCACCACTTGCCGCAT
CTGCAGCACCCTCAGCATCATCCCGGTATGCTTGGAGTTGCTCCTCTCCAAGGATTGCCA
CATCCACAGCATCCTCAACTTCACCCTGGCATGAATCTGAACGACTCTATGAACCAGCAC
ATTGAACTCGTGTTACAAATGGAGCAGCACCCGCAGTTTGACAACAACAGTTTTGCAAAC
ACCCAGCAGTACGCGGGCGGCGTGGGCGGGGTGGGCGGCGTCGGTGGAGTGGGCGGCGTG
AGCGCGTCCAGTAGCGGCGTGGGCGGCGCGGGGCTCGTGAACGGAGCGTCCGTGGTGCCC
GCCGCGCCGGACTCGGCCCAGCACCACCAACCCTTCGAGCTGCAGTCAGGGTCGGTGGTC
CGCGGGGATGCGCTACGGAACAACGCGCTTCAGAAGAAACTAAGGGATCTCTCTGTTGGG
GAATAA
Protein sequence:
MKWPGTGGEEEAGEAGLQTARVSQSRAQDDAAVHYVFQRENQEADLSTLAPKQRWAVCED
SIAENQDKWKNHTPITMNNIQHQGHIQLKNSQTNQQYINQAIASSVGTLAINPSVIGSHP
AHLTTNMVHTQLAPLQNHTLGNNLAIQNSMMLQPLQGMQNAPQMGQQGLYDIHQHPATPM
QAPMNGMGKSAEHLMYLSQAGMLAPGTNQFLQQGQNQLGLTPVAAIRNQIAPSAKKLWDK
GPGAGGDIKGPPHLPPLQLNPEQMWRDPTWSAQAVEHNVGVPMMGTRRGVAFPGGDASSI
LSPRDTAGLGVKMVEYVLRGSPTEGGVAGAVAGGGDKVAGVVAGLRGMVLDERSEDKPAA
ASPFDKDLHELHDHAALQNGLHNGQDDDKAFNRTPGSRQPSPAEEEGGVGGMNNVGTGGV
NAGGVGVGVGVGVRNGEAGAFPLLPHALPAPQPQLHHLPHLQHPQHHPGMLGVAPLQGLP
HPQHPQLHPGMNLNDSMNQHIELVLQMEQHPQFDNNSFANTQQYAGGVGGVGGVGGVGGV
SASSSGVGGAGLVNGASVVPAAPDSAQHHQPFELQSGSVVRGDALRNNALQKKLRDLSVG
E