| New model in OGS2.0 | DPOGS208739 |
|---|---|
| Genomic Position | scaffold661:+ 75901-97279 |
| See gene structure | |
| CDS Length | 2139 |
| Paired RNAseq reads | 5960 |
| Single RNAseq reads | 15938 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003401 (1e-174) |
| Best Drosophila hit | pumilio, isoform B (2e-144) |
| Best Human hit | pumilio homolog 2 (7e-137) |
| Best NR hit (blastp) | PREDICTED: similar to pumilio [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | pumilio [Bombyx mori] (1e-168) |
| GeneOntology terms | GO:0048477 oogenesis GO:0007280 pole cell migration GO:0005737 cytoplasm GO:0042078 germ-line stem cell division GO:0003730 mRNA 3'-UTR binding GO:0017148 negative regulation of translation GO:0007281 germ cell development GO:0001709 cell fate determination GO:0045727 positive regulation of translation GO:0005515 protein binding GO:0008258 head involution GO:0007268 synaptic transmission GO:0008595 anterior/posterior axis specification, embryo GO:0007067 mitosis GO:0045786 negative regulation of cell cycle GO:0003729 mRNA binding GO:0016477 cell migration GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay GO:0000900 translation repressor activity, nucleic acid binding GO:0045892 negative regulation of transcription, DNA-dependent GO:0007616 long-term memory GO:0048813 dendrite morphogenesis GO:0050804 regulation of synaptic transmission GO:0008582 regulation of synaptic growth at neuromuscular junction |
| InterPro families | IPR001313 Pumilio RNA-binding repeat IPR016024 Armadillo-type fold IPR011989 Armadillo-like helical |
| Orthology group | MCL11567 |
Nucleotide sequence:
ATGGTGGTGCTGGAGGGCGGTGGCGCCCTGCTCGAGCCGGCCCTGGCCCTGGACGGTGCC
ACGGCCGCCTGTCTGGAGCGTGCCTACGCGCAGGCCGATGTGTCCCTTAAACTGTTACCG
AAACGTTATATAAATTTGCACCAGTGGTTGTCGCCTGTGACCACGTCGGTGACGGCGGCC
GCCGCTGCCGGGAAGGATCTCAAATTACAAATTCAGTTGTTCCGTTCGCAACAGGCGGCG
GCGGCCGGCGGTCAGGCTGCTGCGGCACAGTTACAGCTGCTGCAGCAACAGCAACAACAG
CAGTTCCAGCTGCAACAACAGCTCGCCGCCCAGCAGGCTTTCACACAGGCGCCGTACGTG
ATCAACGCCGGCCAGGAAGGCGCGCCGTACGTGAGCGCGTTGATCGCCGGCGTGCCGCCA
TACTATGGAGTGGCGGCGCCTTGGGGAGTATACCCCGGGCTGGTGGCGCAGCCGGCGCAA
CAGCAGGCCCAGCAGCCGCGGCGCCCGCTCACGCCGCAGCAGGGCGAGCAGCAAGTGAAC
GGCCAGGGGCAGTACGTGATCCCCTACTACGACCCCGGCTCGCTGGTGATGGGCGGCAGG
AACGGGACGCCGCTGAGGCTCGTATCCCCCGGCGGAGTTCTCGCTCCCCGCCAGTACCCT
GCGCCCACACACCCCGCCGCCACGCCCGCCCCGCAGCCGCCGTCACAGCAGCAGCAGCAG
CAACAACCAGGAGCGTGTGCCGGAGGAGCGGGCGGCCCTGCCGGCAGGAGGGACTCGCTA
GAGTTCGGCGGGGGCCTGCAGGACTACACGCGCAAGTGGGGGCCTTCACCGCTGTCACCG
CCGCTGGGAGCCCTCGGACCGGTGGGGCTCCGGCCGGTGTCCGCCGCGCCCGGAGCTGAG
ACCGCCAAGTACAGAGTGAGCAGTTTGGCGCAAGGCCTGACCTCCAACAGCGGAATGTTC
GGTTCGTCGTCATCACTATTGAGCAAACTGAGCGGTGTCGGAACCATCTCAGGTTGGTAC
CACCACATACACCCCACAGCGATACATGAACGTGTCGACAAGCTGTCGGAGAGTTGCAGA
AGATACAAGAACCAGATACGTCTCCTGGTGAACAAGCTGAAGGAGGCTGGGATTGAAGAC
GTTCAAGATATACTTGAAGGAAATGGTGAGTTTAGATGGTTTATACAACAGAAGTTGGAG
AGAGCAACGGTTCAAGAGAAACAGATGGTGTTTAATGAAATTATCGGCGCCGCGTACAGT
CTCATGACGGACGTGTTCGGCAACTACGTCATACAGAAGTTCTTCGAGTTCGGCACGACG
GAACAGAAGACGACGCTAGCTCAAAAGGTGCGCGGACACGTGCTGGCGCTGGCGCTGCAG
ATGTACGGCTGTCGGGTCATACAGAAGGCGCTGGAGTCCATACCGCCCGAACAGCAACAG
GAAGTGGTCAGGGAGCTGGACGGACACGTGCTCAAGTGTGTCAAGGACCAGAACGGCAAC
CATGTTGTACAAAAATGTATAGAGTGCGTCGAACCGGCGGCGTTACAGTTTATAATAAAC
GCGTTTGCCGGTCAAGTGTACGCGCTGTCGACTCACCCCTACGGCTGCAGAGTGATACAA
CGCATCCTGGAGCACTGCACGGCCGAGCAGACCGCGCCCGTCCTGGCCGAGCTACACGCA
CACACCGACCAGCTCATACAGGACCAGTACGGTAACTACGTGGTACAACATGTGCTGGAG
CACGGCGCGGCGGAGGACAGGTCGCGGCTGGTGGCCGGCGTGCGGGGGAAGGTGCTGCAG
CTGTCACAGCACAAGTTCGCCTCCAACGTGGTCGAGAAGTGTGTGACGCACGCCACGCGC
AACGAACGCGCTCTGCTCATCGACGAGCTGTGCGGGTTTAACGATAACGCTCTCCACGTC
ATGATGAAGGACCAGTACGCCAACTACGTGGTCCAGAAAATGATCGACGTGGCGGAGCCG
ACGCAGCGGAAGGTGCTGATGCACAAGATCCGACCTCACATCGGCTCGCTGCGCAAGTAC
ACGTACGGAAAACACATCATCGCCAAGCTGGAGAAGTTCTTCATGAAGGCGCCGGAGCTG
GGCCCCATCGGCCCGCCGCCGCCCAACCCGGTCCTGTAG
Protein sequence:
MVVLEGGGALLEPALALDGATAACLERAYAQADVSLKLLPKRYINLHQWLSPVTTSVTAA
AAAGKDLKLQIQLFRSQQAAAAGGQAAAAQLQLLQQQQQQQFQLQQQLAAQQAFTQAPYV
INAGQEGAPYVSALIAGVPPYYGVAAPWGVYPGLVAQPAQQQAQQPRRPLTPQQGEQQVN
GQGQYVIPYYDPGSLVMGGRNGTPLRLVSPGGVLAPRQYPAPTHPAATPAPQPPSQQQQQ
QQPGACAGGAGGPAGRRDSLEFGGGLQDYTRKWGPSPLSPPLGALGPVGLRPVSAAPGAE
TAKYRVSSLAQGLTSNSGMFGSSSSLLSKLSGVGTISGWYHHIHPTAIHERVDKLSESCR
RYKNQIRLLVNKLKEAGIEDVQDILEGNGEFRWFIQQKLERATVQEKQMVFNEIIGAAYS
LMTDVFGNYVIQKFFEFGTTEQKTTLAQKVRGHVLALALQMYGCRVIQKALESIPPEQQQ
EVVRELDGHVLKCVKDQNGNHVVQKCIECVEPAALQFIINAFAGQVYALSTHPYGCRVIQ
RILEHCTAEQTAPVLAELHAHTDQLIQDQYGNYVVQHVLEHGAAEDRSRLVAGVRGKVLQ
LSQHKFASNVVEKCVTHATRNERALLIDELCGFNDNALHVMMKDQYANYVVQKMIDVAEP
TQRKVLMHKIRPHIGSLRKYTYGKHIIAKLEKFFMKAPELGPIGPPPPNPVL