| New model in OGS2.0 | DPOGS208741 |
|---|---|
| Genomic Position | scaffold661:+ 117203-123740 |
| See gene structure | |
| CDS Length | 1146 |
| Paired RNAseq reads | 1344 |
| Single RNAseq reads | 3507 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003403 (3e-115) |
| Best Drosophila hit | E2F transcription factor, isoform A (5e-29) |
| Best Human hit | transcription factor E2F3 (7e-37) |
| Best NR hit (blastp) | E2F1 [Bombyx mori] (1e-100) |
| Best NR hit (blastx) | E2F1 [Bombyx mori] (2e-84) |
| GeneOntology terms | GO:0006350 transcription GO:0007049 cell cycle GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0005667 transcription factor complex GO:0051726 regulation of cell cycle GO:0005634 nucleus GO:0005515 protein binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006915 apoptosis GO:0045449 regulation of transcription |
| InterPro families | IPR015633 E2F Family IPR003316 Transcription factor E2F/dimerisation partner (TDP) IPR011991 Winged helix-turn-helix transcription repressor DNA-binding |
| Orthology group | MCL14115 |
Nucleotide sequence:
ATGGCTTCACAAACGAGGGGAGGAATTTGGAGAACGGCGTCGCTAGGGGTTGCTTGGTTC
GTGCGGCCGCTTCGCGCCTGCGCGCGTAGTTCGCGCCACTGCTACGTCGCTTGCAAGCCA
GATGTTCTGAAAAGCTTCCTGTCGTCGTTACCGTTTGCGTCGAAAACATTAAATGTCGTT
TTATGGTTCTGTATTCGGATATCGTTCGCTTACACCTTTCCGATGCCGAGGGGGGTGAAG
CGAGGAGCGGCGGAAGGCGAAGCTGAGGTGGTGGTACGCGTCGGGGCTTCTCCGTCGCAC
ACCACGCTCCTGGACGACAGCCCTAGCCAGCCCATAAGCTACCACCTGCTCGACCATGGC
TATGGTGCCACACCTCAACACCAAATACGCCGGGAAGCGCCCACCGCACCGCCGAAGACA
TCTGAAGCGGTGAAACGTAGACTGAACCTGAGCGAGAGCAGCTCAGGCAGCCAGGGTCAC
GTGGTGCCGATGAAGGCGGACTTCAAGACGCCCAAGCAGAAACGCGTCAAAGTCCTAACC
CCGTACAGCCGACCGTCCAGTTCTATGAAAAAATACACAGAACGCTCCAGGTTTGACACG
TCATTGGGTCTACTGACGAAAAAGTTTGTAGCTCTCCTCAAGTCGTCGCCGAACGGTGTT
TTAGATCTTAATATAGCAGCTGAGCATCTCTCTGTACAGAAACGCCGAATATACGACATC
ACAAACGTATTAGAGGGTATAGGAATATTAGAGAAGAGATCCAAAAATAATATACAATGG
AAATGTGGTGTAGGAGGTGGAGGAGTGAACGAAGAGAACCGTGTGCGTCGTCTGCGGCGC
GAGGTGCGGTCGCTGGGCGGGCGGGAGGCGCGGGTCAGTCGAGCGGTGGCCGCGGCCGAG
CAGGCGCTGTCTCGACTGTCGGCGGAGCACGGGGCGAGGGCCTACATAACGTACGCGGAC
CTCAGGTCCATTAAGGACTTTAGAAATCAAACTGTTATACCCATCAAGGCCCCGCCGGAC
ACCAGGCTCAGTGTACCACATCCAGATGAGAAAGGGTATATGATACATCTCAAATCAATT
TCTGGAGAAATAGAAGTGTACCTCTGTCCTAAAGAACGTCCGCCCACGCCGCCGCCCTGT
GAGTAA
Protein sequence:
MASQTRGGIWRTASLGVAWFVRPLRACARSSRHCYVACKPDVLKSFLSSLPFASKTLNVV
LWFCIRISFAYTFPMPRGVKRGAAEGEAEVVVRVGASPSHTTLLDDSPSQPISYHLLDHG
YGATPQHQIRREAPTAPPKTSEAVKRRLNLSESSSGSQGHVVPMKADFKTPKQKRVKVLT
PYSRPSSSMKKYTERSRFDTSLGLLTKKFVALLKSSPNGVLDLNIAAEHLSVQKRRIYDI
TNVLEGIGILEKRSKNNIQWKCGVGGGGVNEENRVRRLRREVRSLGGREARVSRAVAAAE
QALSRLSAEHGARAYITYADLRSIKDFRNQTVIPIKAPPDTRLSVPHPDEKGYMIHLKSI
SGEIEVYLCPKERPPTPPPCE