New model in OGS2.0 | DPOGS205749  |
---|---|
Genomic Position | scaffold1825:+ 38157-40316 |
See gene structure | |
CDS Length | 1500 |
Paired RNAseq reads   | 15 |
Single RNAseq reads   | 56 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008583 (2e-06) |
Best Drosophila hit   | connectin (2e-49) |
Best Human hit | insulin-like growth factor-binding protein complex acid labile subunit isoform 1 precursor (5e-23) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (4e-86) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP002006-PA [Tribolium castaneum] (4e-91) |
GeneOntology terms    | GO:0007155 cell adhesion GO:0005886 plasma membrane GO:0016200 synaptic target attraction GO:0007413 axonal fasciculation GO:0007156 homophilic cell adhesion |
InterPro families    | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype |
Orthology group | MCL31012 |
Nucleotide sequence:
ATGCGGGCTCAAAAGATACCCGCTGCCTTGCTACTGTTGCTGTTTGCAATAGACTCGTTA
CACGCCAACCGAAGAAAACAAAAAGAAAAAATCATTCAACTGACAACAAATATTTGTGAC
ATAAGTGACCGAGATTCCAAAGTACATTGTTACTGTGAAAACAGTCAGGAAATAAATGAG
GCAATTAAAACAGAATGCTGGGTATTCAACGGTGGTATAGACAAGTCGGATCCTTTATGG
CCAAGCTTCACATCGCAATCAAATATAGAAACGTTGGCATTTAACGTTCGAGCTGACGGA
GGATTAAATTTCGTGCCAACAAAGGTGCTGAGATATTTGAGAAAGTTGAAGCATTTCAGC
ATAAAGTACAGCTCGATATTAAAAATAGAAAGCAACACTTTTGTTAATTTGACGTCGCTT
CAAGAAATGACATTGACCAAAAATCAAATCGTTGTGCTCAGTAAACATTCCTTTTACAAC
TTGCCTAACTTAACATCACTTACTTTGGATGAAAACAGATTGAAAAAGATTGAAACTGAT
ACTTTTTATGAATTGCCAAATTTACAGAAATTGTTTCTCACTAGTAACAATATTAGTGTC
TTAGAAGATGGAGCATTTAGACACCTCATCAATTTGCTGGAACTTGAGCTGGACAGGAAT
AATATAAGTGATTTGAAGAAAGAATGTTTTGATGGACTTGCCAATCTTAAACGTCTAGAT
CTAAAAAGAAATAAAATATCCATACTCAATTCATTTACATTCATAGAGCTCTGGAATCTT
CAAGAGTTGATGTTGGATTATAATGATATTTATATATTAGAGCAACGCACATTTGATGGA
TTGTCGCAATTAAAAAAACTGAGCTTAAGTCATAATAAGTTGGTAACCCTGACCGATGGC
TTGTTTGAAGGTGTTCGAGGATTATCAGCTTTAGATTTAAGGCATAACAAACTAAAGAGA
TTCACGTTAGAGAACTTACGTCCAATTTATGATAATCTAAAATCTCAGAAAAGTTTTATC
TATCTAGAAGAGAACGACTTTGACTGCGATTGTCACCTGGCGTGGATGCATAAGCTACGA
CACGAAGCGAAGAGTATTAAAGTACGAACGTCTTTAGAAAATTTTGTCTGTAAATTTAAT
ACTGATACAGTGATTAGTTCACATTTGACTTATTACGAAAGAATGAATATCGAGAGTAAT
GTAGAAGAAGAAAAAATACGAAACGATTTGAATAATGACGAATTTAATGAAGACACCGAT
GATGTTTATGTGGAAGAACCGAAAAGGGTAAAAGCTGATAACGAGAGGACTTTACTTCAA
ATTCCAGTAGAATTACTTCCTTGTCCTGCGCAAGTTAAAACAGTCACAGATAGGACATAC
ACATACCCATCGCAAAACGAAGCCAAAGATTACAGAAACTTAATTCTCTCGTCTTCAATA
ACATGTTTTTATAACAAAGTATTAATCGTTGTACTTTTGTTGTTGTTGATGTTTGAATAA
Protein sequence:
MRAQKIPAALLLLLFAIDSLHANRRKQKEKIIQLTTNICDISDRDSKVHCYCENSQEINE
AIKTECWVFNGGIDKSDPLWPSFTSQSNIETLAFNVRADGGLNFVPTKVLRYLRKLKHFS
IKYSSILKIESNTFVNLTSLQEMTLTKNQIVVLSKHSFYNLPNLTSLTLDENRLKKIETD
TFYELPNLQKLFLTSNNISVLEDGAFRHLINLLELELDRNNISDLKKECFDGLANLKRLD
LKRNKISILNSFTFIELWNLQELMLDYNDIYILEQRTFDGLSQLKKLSLSHNKLVTLTDG
LFEGVRGLSALDLRHNKLKRFTLENLRPIYDNLKSQKSFIYLEENDFDCDCHLAWMHKLR
HEAKSIKVRTSLENFVCKFNTDTVISSHLTYYERMNIESNVEEEKIRNDLNNDEFNEDTD
DVYVEEPKRVKADNERTLLQIPVELLPCPAQVKTVTDRTYTYPSQNEAKDYRNLILSSSI
TCFYNKVLIVVLLLLLMFE