| New model in OGS2.0 | DPOGS200761 |
|---|---|
| Genomic Position | scaffold2215:+ 21505-26656 |
| See gene structure | |
| CDS Length | 969 |
| Paired RNAseq reads | 259 |
| Single RNAseq reads | 995 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004227 (5e-62) |
| Best Drosophila hit | flap endonuclease 1 (1e-53) |
| Best Human hit | flap endonuclease 1 (4e-46) |
| Best NR hit (blastp) | flap endonuclease-1 [Aedes aegypti] (6e-129) |
| Best NR hit (blastx) | PREDICTED: similar to flap endonuclease-1 [Tribolium castaneum] (1e-61) |
| GeneOntology terms | GO:0005634 nucleus GO:0048256 flap endonuclease activity GO:0006281 DNA repair GO:0004519 endonuclease activity GO:0003677 DNA binding |
| InterPro families | IPR006085 XPG N-terminal IPR006086 XPG/RAD2 endonuclease IPR020045 5'-3' exonuclease, C-terminal subdomain IPR019974 XPG conserved site IPR006084 DNA repair protein (XPGC)/yeast Rad IPR008918 Helix-hairpin-helix motif, class 2 |
| Orthology group | ND |
Nucleotide sequence:
ATGGGTATTTTAGGATTATCAAAGTTGATTGCAGATATTGCTCCAATGGCTGTAAAAGAA
ACAGAGATAAAAAATTATTTCGGTAGGAAAGTTGCCATCGACGCATCTATGAGCTTGTAT
CAATTCTTAATTGCTGTAAGAAGTCAAGGCGCTCAGCTGACGTCCGTTGATGGTGAAACA
ACATCACACCTAATGGGTACATTCTACAGAACGATTCGTCTCATAGAAGATGGTATCAAG
CCTGTGTACGTTTTTGATGGTAAACCGCCTGATATGAAGTCACATCAATTGAACAAGAGG
GCCGAGAGACGAGAGGAAGCTGAGAAAGAACTCCAAAAGGCTACCGAGGCTGGTGACACG
GCATCTATAGACAAGTTCAACCGTCGGTTGGTGAAGGTGACTCAGCAACACGGCGCCGAA
GCTCGGCAGTTGTTGAAGCTTATGGGCATACCCGTGGTGGAGGCTCCGTGTGAAGCTGAG
GCACAATGCGCTGAATTATTCATTGACCTCTGCATTCTGTTGGGTTGTGATTACTGCGGA
TCCATCAAAGGGATCGGACCGAAACGGGCCATCGAACTCATCAAGCAACACCGCAGTATA
GAACAGGTCCTTCACAATATCGACACAAAGAAGTACAGTCCGCCGGAGAATTGGGAATAT
GAAAACGCTCGGAGACTGTTCCAGCAACCAGAAGTTACCGAGGCGAAGGATGTCGAGTTA
AAATGGTCGGATCCTGACGAGGAAGGTCTGGTGAAGTTCCTCTGTGGAGACAAACAGTTC
AACGAGGAGCGCGTCAGGAACGGGGCCAAGAAACTCATGAAGGCGCGCACCGGAACCACG
CAGGGCAGGCTGGATGGATTCTTCAAGGTGTTGTCAACAACACCAAACCCAAAAAGGAAA
GCGGAGGAAGATAAAAAGAGTGCCAACAAGAAAGTTAAAACAGCTGGAAGGGGGCGGAAA
CCGAAATAA
Protein sequence:
MGILGLSKLIADIAPMAVKETEIKNYFGRKVAIDASMSLYQFLIAVRSQGAQLTSVDGET
TSHLMGTFYRTIRLIEDGIKPVYVFDGKPPDMKSHQLNKRAERREEAEKELQKATEAGDT
ASIDKFNRRLVKVTQQHGAEARQLLKLMGIPVVEAPCEAEAQCAELFIDLCILLGCDYCG
SIKGIGPKRAIELIKQHRSIEQVLHNIDTKKYSPPENWEYENARRLFQQPEVTEAKDVEL
KWSDPDEEGLVKFLCGDKQFNEERVRNGAKKLMKARTGTTQGRLDGFFKVLSTTPNPKRK
AEEDKKSANKKVKTAGRGRKPK