| New model in OGS2.0 | DPOGS215609 |
|---|---|
| Genomic Position | scaffold300:- 267006-272566 |
| See gene structure | |
| CDS Length | 1338 |
| Paired RNAseq reads | 1024 |
| Single RNAseq reads | 5460 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003669 (0.0) |
| Best Drosophila hit | Int6 homologue (3e-165) |
| Best Human hit | eukaryotic translation initiation factor 3 subunit E (6e-150) |
| Best NR hit (blastp) | eukaryotic translation initiation factor 3 subunit E [Bombyx mori] (0.0) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 3 subunit E [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0005852 eukaryotic translation initiation factor 3 complex GO:0006413 translational initiation GO:0003743 translation initiation factor activity GO:0005829 cytosol GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR019010 Eukaryotic translation initiation factor 3 (eIF3), subunit 6, N-terminal IPR000717 Proteasome component (PCI) domain IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR016650 Translation initiation factor 3, subunit 6, eukaryotic |
| Orthology group | MCL14937 |
Nucleotide sequence:
ATGAGTTACTCTAAGTTTGACCTTACGTTTAAAATTGGGCAGTATTTGGATCGACATTTA
GTCTTTCCATTACTAGAATTCTTAGCCGCTAAAGAGACATATGACCAATCCGAACTTTTA
CAAGCAAAGTTAGAGATTTTAAGCAAAACCAACATGATCGATTATGTGATTGAAATAAGA
AGTATGCTTTATCCCGATGATGACACACCAGAGGAAATTAAATCTAGAAGAGGAGTAGTA
TTATTGCAACTCCAAGAGCTCCAAGATGCTGTGGAACCAGTTTTAAAACTGATGCAGAGA
GATGATGTTATGAAGACTGTTGAAACCATGAGGGATCCCAAAACTCTTATAAACTACCTA
ACTACCAATAAGGAATTTGATTTCAAAATAGAGATGATAGACAGCATGTATCGTCTAGCT
AAATACCGGTATGAGTGTGGTAATTATGTGGAATCGGCATCATACCTATACTTCTGTCAG
CTGGTTCTATCACCCACTGATAAGAATTATCTATCAGTACTCTGGGGTAAGTTAGCCAGT
GAGATTCTGGTCCAGAACTGGGATGGTGCTCTAGATGATTTGACCAAGTTGCGTGAATTC
ATCGACAACGGTGGCGGCGGCGCCACCGTCAACAATATGCAGGCCCTTCAACAGCGCACC
TGGCTCGTACACTGGTCACTGTTCGTTTTCTTCAACCACGTCAAGGGTCGCGACCTTATC
ATTGAAATGTTCTTATACAAACCATTGTATTTAAACGCCATCCAGACGATGTGTCCCCAC
ATCCTCCGCTACTTGGCAACTGCTGTTATCATAAACAGATCGCGCCGGAACGCTCTTAAG
GATCTGGTGAAAGTAATTCAACAGGAAGCATACACTTACAGAGATCCAATCACTGAATTT
ATTGAGCATCTCTATGTCAATTTCGATTTTGAAGCAGCTCGCAGGAAATTAAACCAATGT
CAAGCGGTTCTTCTCACCGATTTCTTCTTAATAGCGTGCTTGGAGGAATTCGTAGAGAAT
GCCCGTCTTATGATCTTCGAGACCTTCTGTCGTATTCATCAAGTCATCAGTATTGGAATG
TTAGCCGAGAACCTCAACATGCAGCCAGACGAGGCTGAGTGTTGGATTGTAAACTTGATC
CGCAACGCTCGTTTGGACGCCAAGATCGACTCGAAGCTAGGTCACGTGGTGATGGGAGCA
CAGCCTCTGTCTCCGTACCAGCAGCTGGTGGAGAGAATCGACTCGCTGGCCGTACGTTCC
GAGGCGTTGTCGTCACTCGTGGAAAGGAAGCAGAAAACACGCAACCAAGACATCCGCTGG
GGAGCTCAAGAGTTTTAA
Protein sequence:
MSYSKFDLTFKIGQYLDRHLVFPLLEFLAAKETYDQSELLQAKLEILSKTNMIDYVIEIR
SMLYPDDDTPEEIKSRRGVVLLQLQELQDAVEPVLKLMQRDDVMKTVETMRDPKTLINYL
TTNKEFDFKIEMIDSMYRLAKYRYECGNYVESASYLYFCQLVLSPTDKNYLSVLWGKLAS
EILVQNWDGALDDLTKLREFIDNGGGGATVNNMQALQQRTWLVHWSLFVFFNHVKGRDLI
IEMFLYKPLYLNAIQTMCPHILRYLATAVIINRSRRNALKDLVKVIQQEAYTYRDPITEF
IEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVENARLMIFETFCRIHQVISIGM
LAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMGAQPLSPYQQLVERIDSLAVRS
EALSSLVERKQKTRNQDIRWGAQEF