| New model in OGS2.0 | DPOGS215610 |
|---|---|
| Genomic Position | scaffold300:- 258321-265444 |
| See gene structure | |
| CDS Length | 2730 |
| Paired RNAseq reads | 2493 |
| Single RNAseq reads | 5774 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003670 (0.0) |
| Best Drosophila hit | Argonaute-1, isoform B (0.0) |
| Best Human hit | protein argonaute-2 isoform 1 (0.0) |
| Best NR hit (blastp) | argonaute 1 [Bombyx mori] (0.0) |
| Best NR hit (blastx) | argonaute 1 [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0003743 translation initiation factor activity GO:0016442 RNA-induced silencing complex GO:0005850 eukaryotic translation initiation factor 2 complex GO:0030423 targeting of mRNA for destruction involved in RNA interference GO:0030422 production of siRNA involved in RNA interference GO:0016246 RNA interference GO:0035196 production of miRNAs involved in gene silencing by miRNA GO:0035279 mRNA cleavage involved in gene silencing by miRNA GO:0019899 enzyme binding GO:0035195 gene silencing by miRNA GO:0007416 synapse assembly GO:0006342 chromatin silencing GO:0005737 cytoplasm GO:0005634 nucleus GO:0007367 segment polarity determination GO:0005515 protein binding GO:0006402 mRNA catabolic process GO:0035198 miRNA binding GO:0048471 perinuclear region of cytoplasm |
| InterPro families | IPR003100 Argonaute/Dicer protein, PAZ IPR003165 Stem cell self-renewal protein Piwi IPR014811 Domain of unknown function DUF1785 IPR012337 Ribonuclease H-like |
| Orthology group | MCL10480 |
Nucleotide sequence:
ATGTACCCCGTTGGTCAACCTCCAGCGGGGGAGACGAGTGCTGGTGCAGTGGGTGTGTCG
GGAGCTGTGACATCTGCAGCGGGCACGACAGGGGCATCGCCAGGCGCCCCGACTTCCTCG
CCGCCATCCGGAGCAGCCCCGGTCGGGGTGACGAGTGGCACGCTGGCGTCCCCTGCATCC
GCGCCACCTCCGGACCTACCCGTTCTCACCTGCCCTCGTCGACCCAACTTAGGCCATGAA
GGCCGACCAATAATGCTGCGTGCTAATCATTTTCAAATTTCAATGCCAAGAGGTTTTGTG
CATCATTATGATGTTAATATACAACCTGATAAATGCCCTAGAAAGGTAAATAGAGAAATT
GTTGAGACTATGGTACATTGTTACAATAAGATATTTGGTGCTCTGAAGCCAGTGTTTGAC
GGTAGAAATAATTTATATACAAGGGACCCATTGCCTATTGGCAATGACAGAGTGGAGCTG
GAAGTAATATTGCCTGGTGAAGGAAAAGATAGAGTGTTTCGTGTTACTATTAAATGGGTT
GCTCAGGTATCACTATTTGCATTAGAAGAGGCTTTGGAAGGTCGAACTCGACAGATTCCA
TATGATGCTATATTAGCATTAGATGTGGTGATGAGACATTTACCATCAATGATGTACACT
CCTGTAGGGAGATCATTCTTTTCATCCCCCGAAGGGTACTATCATCCACTTGGTGGTGGC
CGAGAAGTTTGGTTTGGTTTCCACCAATCTGTGCGGCCCAGCCAATGGAAAATGATGCTT
AATATTGACGTGTCTGCAACCGCCTTCTACAAAGCTCAGCCCGTTATAGAATTTATGTGT
GAAGTATTAGATATAAGAGACATTAACGAACAGAGAAAGCCATTGACAGACTCGCAGAGA
GTCAAATTTACCAAAGAAATTAAAGGTCTCAAAATTGAAATCACCCATTGTGGTACCATG
AAGAGGAAATATAGAGTCTGTAATGTCACTAGGAGACCCGCACAAATGCAATCATTTCCT
CTCCAGTTAGACAACGGACAGACAGTGGAATGTACTGTAGCTAAGTACTTCCTTGATAAG
TACAAAATGAAACTCAGATATCCACACCTGCCGTGTCTTCAAGTGGGACAGGAACACAAA
CACACCTACCTCCCGCTAGAGGTGTGTAACATCGTCCCAGGACAGAGATGTATCAAGAAG
CTCACTGATATGCAGACTTCAACTATGATCAAAGCAACCGCTCGCTCTGCTCCGGATAGG
GAACGGGAGATCAACAATCTAGTTCGTCGTGCCAACTTCAATACCGATTTGTATGTGAAA
GAGTTCGGTCTGACCATATCGAATAACATGATGGAGGTGCGTGGACGGGTGCTGCCGCCG
CCGAAGCTCCAGTACGGCGGGCGCGTGTCGTCGCTCGGCGGTCAGCAGGCCTTGCCAAAC
CAAGGTGTGTGGGACATGCGTGGGAAACAGTTCTTCATGGGCGTGGAGATACGAGTGTGG
GCCATCGCGTGCTTCGCGCCTCAGAGGACAGTCAGAGAGGACGCCTTGAAGAATTTCACT
CAACAGTTACAGAAGATCTCAAACGACGCGGGTATGCCGATCATCGGTCAGCCTTGCTTC
TGTAAATACGCGACCGGGCCGGATCAAGTAGAGCCCATGTTCAAATATCTTAAATCTACG
TTTGTACAACTACAGCTGGTTGTGGTAGTGTTACCAGGAAAGACGCCTGTATACGCTGAA
GTTAAACGCGTCGGTGACACGGTCCTGGGCATGGCGACACAGTGCGTTCAGGCGAAAAAC
GTGAATAAAACATCGCCACAGACGTTGAGTAACCTGTGCCTTAAAATTAACGTCAAGCTC
GGCGGTATCAACTCTATTCTTGTGCCGTCTCTACGTCCTAAGGTGTTCAACGAGCCGGTG
ATATTCCTGGGTGTGGACGTGACTCATCCCCCGGCCGGCGACAACAAGAAGCCGTCCATA
GCGGCCGTGGTCGGCTCGATGGACGCACACCCATCCAGATACGCAGCCACAGTGCGGGTA
CAACAACACAGGCAGGAGATAGTCCATGAGATGAGTAGTATGGTTCAGGAGCTGCTGATA
ATGTTCTACAAGAGCACGGGAGGGTTCAAACCTCATCGCATCATAATGTACCGGGACGGC
ATATCAGAGGGGCAGTTCATACATGTGCTGCAACATGAGCTCACCGCTGTCAGGGAGGCC
TGCATTAAGTTGGAAGCGGAGTACAAGCCGGGAATAACTTTCATAGTGGTACAAAAACGT
CACCACACGCGTCTGTTCTGCGCCGACAAGAAGGAGCAGTCTGGAAAGTCTGGGAACATA
CCGGCTGGGACCACGGTGGACCTGGGCATCACACATCCCACAGAATTCGACTTCTATCTG
TGCAGCCATCAGGGAATACAGGGCACGTCCCGTCCTTCTCACTACCACGTGCTGTGGGAC
GACAATCACTTCGGTTCGGACGAGCTGCAGTGTCTGACATACCAGTTGTGTCACACTTAC
GTGCGTTGCACCCGCTCCGTGTCGATTCCCGCGCCCGCGTACTACGCACATCTCGTGGCG
TTCAGAGCGCGTTATCACCTCGTCGAGAAGGAACACGACTCCGGGGAGGGATCGCATCAA
TCGGCCTGCAGCGAGGATCGCACTCCCGGGGCCATGGCCAGAGCTATCACTGTACACGCC
GTCACCAAGAAAGTCATGTACTTCGCATAA
Protein sequence:
MYPVGQPPAGETSAGAVGVSGAVTSAAGTTGASPGAPTSSPPSGAAPVGVTSGTLASPAS
APPPDLPVLTCPRRPNLGHEGRPIMLRANHFQISMPRGFVHHYDVNIQPDKCPRKVNREI
VETMVHCYNKIFGALKPVFDGRNNLYTRDPLPIGNDRVELEVILPGEGKDRVFRVTIKWV
AQVSLFALEEALEGRTRQIPYDAILALDVVMRHLPSMMYTPVGRSFFSSPEGYYHPLGGG
REVWFGFHQSVRPSQWKMMLNIDVSATAFYKAQPVIEFMCEVLDIRDINEQRKPLTDSQR
VKFTKEIKGLKIEITHCGTMKRKYRVCNVTRRPAQMQSFPLQLDNGQTVECTVAKYFLDK
YKMKLRYPHLPCLQVGQEHKHTYLPLEVCNIVPGQRCIKKLTDMQTSTMIKATARSAPDR
EREINNLVRRANFNTDLYVKEFGLTISNNMMEVRGRVLPPPKLQYGGRVSSLGGQQALPN
QGVWDMRGKQFFMGVEIRVWAIACFAPQRTVREDALKNFTQQLQKISNDAGMPIIGQPCF
CKYATGPDQVEPMFKYLKSTFVQLQLVVVVLPGKTPVYAEVKRVGDTVLGMATQCVQAKN
VNKTSPQTLSNLCLKINVKLGGINSILVPSLRPKVFNEPVIFLGVDVTHPPAGDNKKPSI
AAVVGSMDAHPSRYAATVRVQQHRQEIVHEMSSMVQELLIMFYKSTGGFKPHRIIMYRDG
ISEGQFIHVLQHELTAVREACIKLEAEYKPGITFIVVQKRHHTRLFCADKKEQSGKSGNI
PAGTTVDLGITHPTEFDFYLCSHQGIQGTSRPSHYHVLWDDNHFGSDELQCLTYQLCHTY
VRCTRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSHQSACSEDRTPGAMARAITVHA
VTKKVMYFA