New model in OGS2.0 | DPOGS215611  |
---|---|
Genomic Position | scaffold300:- 238207-241329 |
See gene structure | |
CDS Length | 1167 |
Paired RNAseq reads   | 3578 |
Single RNAseq reads   | 9062 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003671 (1e-92) |
Best Drosophila hit   | CG13349, isoform E (3e-44) |
Best Human hit | proteasomal ubiquitin receptor ADRM1 precursor (3e-38) |
Best NR hit (blastp)   | AGAP004758-PB [Anopheles gambiae str. PEST] (1e-81) |
Best NR hit (blastx)   | ADRM1 [Culex quinquefasciatus] (3e-53) |
GeneOntology terms    | GO:0005634 nucleus GO:0005737 cytoplasm GO:0061133 endopeptidase activator activity GO:0000502 proteasome complex GO:0043248 proteasome assembly |
InterPro families   | IPR006773 26S proteasome complex ubiquitin receptor, subunit Rpn13 |
Orthology group | MCL14048 |
Nucleotide sequence:
ATGACTCTTAAAGGACGAATGGTACATCCCGACAAGAGGAAGGGTTTATTATATGTGTAT
CAAGGTGAAGACTCATTGATGCATTTCTGTTGGAAAGATCGTACAACTGGAGAAGTTGAA
GATGACCTATTGATCTTTCCGGATGACTGTGAATTTGTAAGAGTTAATGAATGTACAACC
GGAAGAGTATATGTATTGAAATTTAAATCATTTTCAAAGAAATATTTCTTTTGGATGCAG
GAGCCAAAAACAGACAAGGATGATGAATATTGTCGCCGTCTCAATGAAGCGTTGAATAAC
CCACCAACTTCCGGTGGTCGTGGTGGTAGCGGCGGTGGTGCCCAAGATGGAGACTTACAC
AACCTTCTTAACAACATGTCACAACAGCAATTGATGCAGTTATTTGGTGGTGTTGGTCAG
ATTGGTGGATTATCATCACTGCTGGGAACTATGGGCAACAACAGTAGCAGTGGCAACGCA
ACTCGTCCATCTGGAAATAGCAGCAATTCCCGTGGTGGTTCGGCACCTCGGTCTGAGCCC
ACAACACGTACATCAGCACGAGCTCGTGATGAACGCACACCTGTTCCCATCGTTGCCCCC
ACACCCGCTACTGTTCCCGCCCCTACTGCCACCCCACCCAACACTGCCACTGGAACTCAA
CCTCGCAGTGGTCAGATATTTCTATCCGACCTGCAGCGGTACTTCTCCGGTCTAGGCAAC
GCACCTCCGGAGGGCGAAGGCGCGGTGGGTGGGACGGGGGCTTCCCGCGTGGAGTTGGGG
GCTGCGCTGGCGACTCCGGAGGTGGTGTCAACGGCCAGCGAGCCGGCTAACTCCCAGCGC
CTCGCCCCTCACCTGCCGCCCGCGCCGCCCGCCGCCCCCCAGGACGATGTAAGGACCACA
CTGCTCTCACCGCAGTTCGCCCAGGCAGCCAATCAGTTTTCATCGGCTCTTACATCCGGT
CAAATGGGACCAGTCATGACACAGTTTGGGCTTCCGGCTGACGTCACTACAGCCGCCAAC
ACGGGAGACATGCAGGCCTTCTTTAAAGCCTTGGAGAGTGCGTCTTCATCCGAAAGCGGA
AAGTCGGAAGGAGACAGAAAGAAAGATAAACCTCAAGATGACAAAAATGACAAAAAAGAT
GGTGATGCTGGAATGTCACTCGATTAA
Protein sequence:
MTLKGRMVHPDKRKGLLYVYQGEDSLMHFCWKDRTTGEVEDDLLIFPDDCEFVRVNECTT
GRVYVLKFKSFSKKYFFWMQEPKTDKDDEYCRRLNEALNNPPTSGGRGGSGGGAQDGDLH
NLLNNMSQQQLMQLFGGVGQIGGLSSLLGTMGNNSSSGNATRPSGNSSNSRGGSAPRSEP
TTRTSARARDERTPVPIVAPTPATVPAPTATPPNTATGTQPRSGQIFLSDLQRYFSGLGN
APPEGEGAVGGTGASRVELGAALATPEVVSTASEPANSQRLAPHLPPAPPAAPQDDVRTT
LLSPQFAQAANQFSSALTSGQMGPVMTQFGLPADVTTAANTGDMQAFFKALESASSSESG
KSEGDRKKDKPQDDKNDKKDGDAGMSLD