New model in OGS2.0 | DPOGS215796  |
---|---|
Genomic Position | scaffold300:+ 99233-102073 |
See gene structure | |
CDS Length | 1692 |
Paired RNAseq reads   | 169 |
Single RNAseq reads   | 656 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007089 (2e-09) |
Best Drosophila hit   | CG10366 (3e-24) |
Best Human hit | zinc finger protein 16 (7e-27) |
Best NR hit (blastp)   | zinc finger protein, putative [Pediculus humanus corporis] (7e-32) |
Best NR hit (blastx)   | hypothetical protein LOC560276 [Danio rerio] (1e-32) |
GeneOntology terms    | GO:0003676 nucleic acid binding GO:0005622 intracellular GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0046872 metal ion binding |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
Orthology group | MCL18933 |
Nucleotide sequence:
ATGGTTGAATCGAATTCGGATTTCGAAAGATGTTGTCGGTTGTGTGCAGAAGAGCAAGAA
GTTACCATAATGATTTTCAGCAAAGAAGCTGAAGTCATGCTTTTGCAAAATAAATTAAAT
AAATACTTACTTATAGAGGTCGATGAAGATGATAAATTGCCGAAAAATATATGCATCCAA
TGCTGTTCAAAGTTACAAATAGTAAGTGAATTCATTGACAATGCACACAGAGCTCAGGAG
GTTTTACTTAAGCAAAGTCTGATGTTAGAAGATAATGATGAAAATAAACCTATTTTGATT
ACTGACATCAAATCTGAAACAGATTTTGACAGTGATACAAAATGCATGGAAGTAAATGTT
GATCCAATGATGGTTCTTCAAAACTCTGAAGTGGAGGAGGCACCTAATTTAGAAAAATCT
TGTGAATCCGTCGAATATGAAGATGAAATAACTTACCTGAATGGCGCTGATGGTGAAAAT
GTAACAATCAAATTAATTAAAAAAGGTGATAAATTGATGGAAGACGATAAAAAAGACACC
AAGCCCTTTCAATGCATCACCTGTAATAGGGGCTACTATACAGAGTTGGCCCTCAAAAAC
CATTCATGGATACATTTCAATGAAGATAAAATTGTTAAACCCTTTAAATGTAGCTCTTGC
GGTGACCAGTTTGAATATAAAAATGAATTGATATCACATCTTAAAGAACATAGAACACGA
GGAATGTGTAATATATGTGGACGACTGTTCGTTGTAAATTCGTATGCGGTAGAAGTAGGA
GAAGAAGTAGGAGTGAGAGGTATAACAGCCAAAACTCTCTACAACCTGCTAACATACTTG
GGCCTGCCAAGAACTAACATCAGTTCATTCTTTGAACATGCATTGATGGCAGCCCTAGTA
GAGAGAGGCACTTGGACAGTGGAGTTGAGCGTTTATCATGCGTTGGATAAGGGGCCCCTT
AAACCTACACCTGGGTCGCAAGTCCCAGGCACTATTAAAGCTCCTCTCTGCAATGCGATG
GACCCGGCAGCCGTAAGTTTCAGGAATGAAAACAATTTAGTGGAGCATATGGAAGCACAC
ACTTCAACGAGTAGTAGATCATACACATGCAAAGTTTGTGGCCGCTCCTATAACACAAGT
AGCAATTTAAAAACACATATGGTTACCCACAGCAATGAAAGACCTTACAAGTGCATTTAT
TGTAAGAAGAGTTTTAAGAGAAATCAAGACTTAAAGTTTCATATCAATCAGCACACAGGT
GCCAAGCCATACAAATGTCCGTATTGTGACAAAAGTTTTGCTAGTTCTGGTAATTGTTAT
TCTCACAAGAGTAGAATGCATCCAGAAATTTCAATAGGCGATGGTAAGATGAAGAAGGAT
ATAAGCGAAAAAATAAAGGAAACAAAGAAGCCAGTGATGAAACAACAATTAAAACTTAGG
CCGATTGCTCCCAAACCTGTGGTACTGAAAGCTAATTTTAAATATCAATGTACTATATGC
CATCATAGCTTTATGAAAAGGGATAATTTTATGTATCACATGTACCAGCATACGGGTGAA
AAACCATTTCACTGCTTGTATTGCGATGAAAAGTTTGTAACAAGGAAAGGCCTTTTAATA
CACCATGATATAGTTCATAATGGGCAAGATCGGCCCTTAGCACTGCTGTCAAAAAACGTA
TTATTAAAGTAA
Protein sequence:
MVESNSDFERCCRLCAEEQEVTIMIFSKEAEVMLLQNKLNKYLLIEVDEDDKLPKNICIQ
CCSKLQIVSEFIDNAHRAQEVLLKQSLMLEDNDENKPILITDIKSETDFDSDTKCMEVNV
DPMMVLQNSEVEEAPNLEKSCESVEYEDEITYLNGADGENVTIKLIKKGDKLMEDDKKDT
KPFQCITCNRGYYTELALKNHSWIHFNEDKIVKPFKCSSCGDQFEYKNELISHLKEHRTR
GMCNICGRLFVVNSYAVEVGEEVGVRGITAKTLYNLLTYLGLPRTNISSFFEHALMAALV
ERGTWTVELSVYHALDKGPLKPTPGSQVPGTIKAPLCNAMDPAAVSFRNENNLVEHMEAH
TSTSSRSYTCKVCGRSYNTSSNLKTHMVTHSNERPYKCIYCKKSFKRNQDLKFHINQHTG
AKPYKCPYCDKSFASSGNCYSHKSRMHPEISIGDGKMKKDISEKIKETKKPVMKQQLKLR
PIAPKPVVLKANFKYQCTICHHSFMKRDNFMYHMYQHTGEKPFHCLYCDEKFVTRKGLLI
HHDIVHNGQDRPLALLSKNVLLK