| New model in OGS2.0 | DPOGS215803 |
|---|---|
| Genomic Position | scaffold300:+ 273828-283830 |
| See gene structure | |
| CDS Length | 5640 |
| Paired RNAseq reads | 6814 |
| Single RNAseq reads | 16352 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003521 (1e-53) |
| Best Drosophila hit | protein partner of snf (1e-46) |
| Best Human hit | death-inducer obliterator 1 isoform c (5e-27) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP004866-PA [Tribolium castaneum] (4e-157) |
| Best NR hit (blastx) | AGAP004866-PA [Anopheles gambiae str. PEST] (9e-130) |
| GeneOntology terms | GO:0005634 nucleus GO:0045449 regulation of transcription GO:0003700 sequence-specific DNA binding transcription factor activity GO:0008270 zinc ion binding GO:0008380 RNA splicing GO:0005515 protein binding GO:0000790 nuclear chromatin GO:0030532 small nuclear ribonucleoprotein complex |
| InterPro families | IPR019787 Zinc finger, PHD-finger IPR003618 Transcription elongation factor S-II, central domain IPR012921 Spen paralogue and orthologue SPOC, C-terminal IPR006576 BRK domain IPR011011 Zinc finger, FYVE/PHD-type IPR019786 Zinc finger, PHD-type, conserved site IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001965 Zinc finger, PHD-type IPR017890 Transcription elongation factor S-IIM |
| Orthology group | MCL16561 |
Nucleotide sequence:
ATGTCTAACACAGTTATTACTAATTACACGGACTTAAATGGACCCTCAACGAAATCTGAT
AATTCTGTGGTTGTTATTGTAAACAAGGATGGATCGTTGTCGGTTGATCAGAATTTACTT
GGTACTCTAATGGGTACAGATGGTTCTCAATCTGCTGGTATCAGTGTTGTGCGTGTTGGG
CATGAGGGGCGGCCAGATGATGCTACTGACTCAGAGAATGAAGATGATAAAGTGCCTCAT
GTTACATTATCAGTAGACAGCTATTACAATGAACCTGCCAGCATAATCAAATATGATAGT
GGAGCAGAAATGTTACAGTCATTGAGAATAGAAACTAGAGAAAATAGCCTTGTAGGCTTT
CAAAATGATCATTGTTATACACCACTTACATCACCAAGTCAAATAATACCACAGAGAAAT
GACAGTTTTGCAGCTTATGATGATCCAGTTATTGAAATAACTAATACACCACCACCCAAA
CCAGTGGCAACACCCAAAAAGATAACCATATTGGAACAGCAAATCATTCCGAAAGGGAAA
AAAATCATTTTAAACACATCAGAGCCACCTATAATTCTTAAAGGAAATGACATTTTAACT
AAACCCTTACCAGTGCTAATGAAATCTAAACTACATGAATCAGAAAAGTCTTCTAAATCT
CAGCTTAAAACCGATGAAAATGTTGAATCATCATCTGTCAGCTCTTCAGGTGATAGTACG
GCAGATAGAGATTCAGATTCTGATTATAAAGATGTCAAAGATAAAACAGGTCCATTAAAG
CAAAGAAAGATAAAATCTAAACCGAGAATCCTTAAAATGGTGCCGCCACCTAGAACTGCT
AAAATTGAATCCAAAGTACCGTCACGACTAAGGGCTAATAAAAATCTTATAAAGAAAGAT
ATTAAAGAAAAACTATTAAATAAAAATCTTATGTTAGATAAGAAGATGATGGAAGCGGAA
CCAGTTAAAAACAATCAAAATTATTCCCTAGTGGTATCAGTTTCACCGCCAACCGTCACT
GATATTAGTAAAGTGACACCAAAATCAGCATCCAAAGTTGTCAAGAAAGACAAAAAAACA
CCAGCACACATGACAGCTCTGTTGACAGACATGACATCTCTGTTTTCTACACCAGATGTA
ATAAGAAGAGTTTCTACTGAAAACAAAGTGCCTTCTAAAGTAGATAAAGAACCTATACTG
CTGAACAAAACTCTCAACGATATAGCCAAGCCCATCAAAGCCATTGAAGGTAAAATATTG
ACCAAAACTACCAGTACAGAGGAAATGAAATCAATAACAGCTCAGAAACCTCTATTGAAA
CAGACCAAAATACCTTGTACTTCCAAAAGTTATGATCCAATACCACAACTTGATGATGCA
AGTTTAGCTCAAATCCTGCAGGATACACCTCAAATGATTAAGGCACAACCAAACATATCT
TCTCATGTTATTAATAGCCCGGGTTTGGCTGGCCCACTCTCTCCGACGTTAGATTTATTA
GGGGGCTTACAACCAGAAGAAGACGGTTTAACAGAAGATCTGTTAATGCATGTAGCTCAG
TTGGTCGAAAGTTCAGAGAATCTGCAAGAGGTAATAGATAAGCAAGTATTGGGAAAAGTT
GATATTTCTGCCAAAGCGGCAGTAGCTTCACCATTCAACCAGTCAACCTCTAATGATCTC
TACACGCCGCCGCCAAAGGCCGTAAAGTCTTTGATTCAACGTAAAGATCCCATTGAAATA
GTCAGGCGGGATGGCAGAGTCATAACTCTACCTCCTATTGAAGCACCAGCTACGAGGTCC
TCTAAGAGAAAAACACAAGTGGAGCAACCCATGGAACCGACACAAGTATTAGGTTCATCG
ACACCAACTCATCCTGTGTCAGTCACTCCAGAACCCTTAGTTCAACAGGTTTCTAAACAG
TACACGAATAAGAAATTAGTACCTAAAAAGCAAGAGCAAAGCATTCCTATGTCAGTTATC
GATAAAATGTCAGCTGAATCTCAAGAGAGTTGGAATTCAGAAGATGACCCTAACAGGCTT
TGGTGTATATGTAAACAACCACATAATAACAGATTTATGATATGTTGTGATGGTTGCGAG
GACTGGTTCCATGGCAAATGTGTCAATATTACAAAAGCCATGGGACAACAGATGGAAGAT
CAAGGAATTGAGTGGAGGTGCCCTAACTGTGTCAAAAATGCTAAAGCCTCGGCAAAAAAT
ACAAACAAGGTACCGACAGGACAAAAGGATAATGTAGGAGTAAGTACACCAACTGCTATC
ACAAAAGAATTGCCCTCAAAAACAACTTGCATAGTTTGTAAGAAACCTGCACGTGCTAGT
AGTATTTATTGCAGTGATGCATGTATTCTTAAACACGCTCAAGACTCCCTCGGGAGTCAT
AGCACCGCCCCAAACAATGATAGCACTAGTGGCAAAAATGAGAAACCCAATTCTGAATCC
AGGGTTATCGTTTATGAGAGAAAATCTGGAAGGCTACTTGCCGGTCCGAACGCGCCCACT
GCTGAAAATCTAAAGGCCTGGTTACAAAAGAATCCGACTTTCGAAGTGGTGCGTCCAGGA
ACGTTGAGCGCCATTAAACCGAACGTTACACGCAAGAAATCGTTGAATGAACCGGCAAAA
ATCCAAACTACGTTGAATTTTGCAAGGATTCCTAGAAAATCTTCCGAAACTCCACCTCTC
AAATCTCCATCAAACGAACCAAAGGAAAAAGAAAAACCCATTATATCACCAAAAGAAGAG
GTGAAGCCTGCCGCTCCCCCAAAAACTCCCACAACGCCAAAATCACAACCACCGACAGTT
GAGACACCTAAGTCGTCCAACAAAGTACCAAACGAAGGAAGGAAAGCCGCTCGCGCTACT
TCAAGTAAAACACAGCCGGTCGTTGAAAAGACACCTTCAGTATCACCGTCAACATCACGA
AGGAAAGACACCCCAGACAGACGCTCAAGGATGAGCTCCGAAGATCCGATCAGAGAAAAT
GTCAGAAAAGCCCTACAGGAACAAATCGCCAGTCGCATGGCGGAGTATGACGGCCCAAAG
TTCACTGAGGAAGAAATCCAACAGTTCGCCTACGACACGGAACTCGAGCTGCACGAATTG
TTTAACAGAGATGTCGGAATGAAATATAAAGCGAAATACAGATCTCTCATGTTCAATATT
AAGGATAGGAAGAATTTATCACTATGGGAGAAGATATGTGAGAAAGTTATTACACCAAAG
CAATTAGTTAGATTTTCACCGGAGGAATTGGCCAGTCAAGAATTAGCGCAGTGGAGAGAC
AAGGAGGCAAAACATCAACTGGAATTAATAAAGAAATCTGAAATAGATCTCTTAGCTGCA
AGCAAAACTTACGTTCTGAAAACACATAAAGGGGAAGAGGTAATGGAAACGAAGGAGTCC
GTGTCAACTGAGTTGGATCCAAACGTACCAGTTGAAGACATAGTGACGGCTTTAAACGAT
GGAGTAGAAGACGAAACGCAACAATCTAACAAAAAGGACGAATCTCAAAAGAAACACACA
AAGAAAAAAGATAAAGAAAACCGAAAGAGTTCCAGGAAAAAAGATAAAGAATCGAGAAGG
AATTCAGAAAAGGGGAAGTCGCGATCGACTAGACGGAAATCTGATGTACAAGGAAAGGAG
AGAAGATCTTCAGGGCGCGTGCGAAGAAGAAGTAGATCGAGCTCGAAATCAAAGAAGGAA
TCCAGAGAAGAATCAGTTTCCAGGGAACGTTCTAGACATAGATCTAGATCGAGAGGAAAG
AAGAGACATTCCACAGATAATTCTAGATCTCAGTCGCGCGGTCGGGATAGATCTAGGTCT
AGGTCAAGACGGTCTCGGTCAAGAGACAGCACAAAAAGAAGACGAAGATCGCGTTCCAAA
GTCAGACAGAATTCTGATGATAAATTTAAACATCGATCAAAATCACAAGAAACGATGGCC
AAAAATAAAAACGATTCAACAGATTCAGATTCAATCGAGAGACCCAAATCGGCTATGATG
AAGGAAACTCACCCTGAGTATGATCCCCATGAACCAATGATAACATCGGCTTTCTCCGAG
GAAGATATAAGAAAATCCAGAGAAGACGTCTACGAGGAACGTTACAACAAGGACATATCT
GACTATTCAAAAGATTTCGACAATGAACATAAGTCGTTTTCAATTGACACTAACATCGCC
TTGTCCCCAACTAAATATGAAAATCAAGACAAGACATCCGCTGAGGTAGAAAGTGACCAG
GAACCGACTAGTACAGTGGAGCACTCAGCGCCAACAGTATGGAACGGCTGTATCAATATG
GTGGATGTTGCTAGATTCTATGTTGCAGCTCACGAGGTTTCAGGTAATGCTGTAGATTTA
GAGGACGATCTCACTCCAGAATTGGACATAGTTGGACGAATAAATCCAGATACCGTATGG
GATTACATCGCCAAGATGAAAAGGGCCGGGAACAAAGATATAGTCTTACTGAAATTACAA
GCTGCTAATGATGAAGAACGAATGCAATATATAGCTTTATACAGCTATCTCAGTAGCCGG
AACAGGCTGGGGGTCGTAAAGGTGACGAACACGGCTACAGTCAAAGACTTCTACATAGTC
CCCTTACCCGCCAACACAAGTCTCCCCGACGTTCTACTGCCTTTAGATGGTCCCGGTTTA
GGGGAAGTTAAGACACATCTTCTAATCTCGATCATCATACGTCAAAGGAAAAAAAGATTA
GCTCCTAACATTCCCAAAGATATTATACCGGCAAAGGTATCCCGTTCTCGCCGCGGGTCC
CGCAAGAGGTCCTACACCCCGCCGTTATCGCCGCGTAGACGACCGCCATTCACCAGCTCG
CTCTCTACAACAGTTAAAGACAAGATCGCAGCCTCTTTAGTAAAGCTGATAGAATTACAA
AAATATAATACTTTCAAGGTTGACTTATGTTCTTATGTACATTCCAGGCTGGGGGTCGTA
AAGGTGACGAACACGGCTACAGTCAAAGACTTCTACATAGTCCCCTTACCCGCCAACACA
AGTCTCCCCGACGTTCTACTGCCTTTAGATGGTCCCGGTTTAGGGGAAGTTAAGACACAT
CTTCTAATCTCGATCATCATACGTCAAAGGAAAAAAAGATTAGCTCCTAACATTCCCAAA
GATATTATACCGGCAAAGGTATCCCGTTCTCGCCGCGGGTCCCGCAAGAGGTCCTACACC
CCGCCGTTATCGCCGCGTAGACGACCGCCATTCACCAGCTCGCTCTCTACAACAGTAAAA
GACAAGATCGCAGCCTCTTTAGCTGCTGATGAGGAACCCTACAGTCCGGGATCAGCGTCT
AACAGTAGCAGTGCCCCGGGACCCTCGCTACCACCAAATACATTGAGAAGTAAAATGGAG
GAATTGAACAGACAGATTGAAGAGCAAAAACAACAAATACTTAAAATGGCACAAGCCGAC
TCATCCGCTGACGGCGAAAACGAGGCCTACTCGCCATCGAGACCGCTGACCCCGCCCGCT
CCCGTGGTTACATTGGATGAAATAGCACTACCTTCAAATCTTCAAGAGATCCTTGCCACA
ATCAAACAAAGATCCGAGACTGCCGCAGATGTTGACATGCGTACATTACCTATGCCTTAA
Protein sequence:
MSNTVITNYTDLNGPSTKSDNSVVVIVNKDGSLSVDQNLLGTLMGTDGSQSAGISVVRVG
HEGRPDDATDSENEDDKVPHVTLSVDSYYNEPASIIKYDSGAEMLQSLRIETRENSLVGF
QNDHCYTPLTSPSQIIPQRNDSFAAYDDPVIEITNTPPPKPVATPKKITILEQQIIPKGK
KIILNTSEPPIILKGNDILTKPLPVLMKSKLHESEKSSKSQLKTDENVESSSVSSSGDST
ADRDSDSDYKDVKDKTGPLKQRKIKSKPRILKMVPPPRTAKIESKVPSRLRANKNLIKKD
IKEKLLNKNLMLDKKMMEAEPVKNNQNYSLVVSVSPPTVTDISKVTPKSASKVVKKDKKT
PAHMTALLTDMTSLFSTPDVIRRVSTENKVPSKVDKEPILLNKTLNDIAKPIKAIEGKIL
TKTTSTEEMKSITAQKPLLKQTKIPCTSKSYDPIPQLDDASLAQILQDTPQMIKAQPNIS
SHVINSPGLAGPLSPTLDLLGGLQPEEDGLTEDLLMHVAQLVESSENLQEVIDKQVLGKV
DISAKAAVASPFNQSTSNDLYTPPPKAVKSLIQRKDPIEIVRRDGRVITLPPIEAPATRS
SKRKTQVEQPMEPTQVLGSSTPTHPVSVTPEPLVQQVSKQYTNKKLVPKKQEQSIPMSVI
DKMSAESQESWNSEDDPNRLWCICKQPHNNRFMICCDGCEDWFHGKCVNITKAMGQQMED
QGIEWRCPNCVKNAKASAKNTNKVPTGQKDNVGVSTPTAITKELPSKTTCIVCKKPARAS
SIYCSDACILKHAQDSLGSHSTAPNNDSTSGKNEKPNSESRVIVYERKSGRLLAGPNAPT
AENLKAWLQKNPTFEVVRPGTLSAIKPNVTRKKSLNEPAKIQTTLNFARIPRKSSETPPL
KSPSNEPKEKEKPIISPKEEVKPAAPPKTPTTPKSQPPTVETPKSSNKVPNEGRKAARAT
SSKTQPVVEKTPSVSPSTSRRKDTPDRRSRMSSEDPIRENVRKALQEQIASRMAEYDGPK
FTEEEIQQFAYDTELELHELFNRDVGMKYKAKYRSLMFNIKDRKNLSLWEKICEKVITPK
QLVRFSPEELASQELAQWRDKEAKHQLELIKKSEIDLLAASKTYVLKTHKGEEVMETKES
VSTELDPNVPVEDIVTALNDGVEDETQQSNKKDESQKKHTKKKDKENRKSSRKKDKESRR
NSEKGKSRSTRRKSDVQGKERRSSGRVRRRSRSSSKSKKESREESVSRERSRHRSRSRGK
KRHSTDNSRSQSRGRDRSRSRSRRSRSRDSTKRRRRSRSKVRQNSDDKFKHRSKSQETMA
KNKNDSTDSDSIERPKSAMMKETHPEYDPHEPMITSAFSEEDIRKSREDVYEERYNKDIS
DYSKDFDNEHKSFSIDTNIALSPTKYENQDKTSAEVESDQEPTSTVEHSAPTVWNGCINM
VDVARFYVAAHEVSGNAVDLEDDLTPELDIVGRINPDTVWDYIAKMKRAGNKDIVLLKLQ
AANDEERMQYIALYSYLSSRNRLGVVKVTNTATVKDFYIVPLPANTSLPDVLLPLDGPGL
GEVKTHLLISIIIRQRKKRLAPNIPKDIIPAKVSRSRRGSRKRSYTPPLSPRRRPPFTSS
LSTTVKDKIAASLVKLIELQKYNTFKVDLCSYVHSRLGVVKVTNTATVKDFYIVPLPANT
SLPDVLLPLDGPGLGEVKTHLLISIIIRQRKKRLAPNIPKDIIPAKVSRSRRGSRKRSYT
PPLSPRRRPPFTSSLSTTVKDKIAASLAADEEPYSPGSASNSSSAPGPSLPPNTLRSKME
ELNRQIEEQKQQILKMAQADSSADGENEAYSPSRPLTPPAPVVTLDEIALPSNLQEILAT
IKQRSETAADVDMRTLPMP