| New model in OGS2.0 | DPOGS215248 |
|---|---|
| Genomic Position | scaffold3356:+ 2862-14969 |
| See gene structure | |
| CDS Length | 3960 |
| Paired RNAseq reads | 4274 |
| Single RNAseq reads | 10856 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008812 (5e-08) |
| Best Drosophila hit | sec31, isoform B (2e-125) |
| Best Human hit | protein transport protein Sec31A isoform 3 (8e-116) |
| Best NR hit (blastp) | PREDICTED: similar to vesicle associated protein, putative [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to vesicle associated protein, putative [Tribolium castaneum] (1e-154) |
| GeneOntology terms | GO:0008021 synaptic vesicle GO:0030134 ER to Golgi transport vesicle GO:0005783 endoplasmic reticulum GO:0005795 Golgi stack |
| InterPro families | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR019781 WD40 repeat, subgroup IPR011046 WD40 repeat-like-containing domain IPR019775 WD40 repeat, conserved site IPR015943 WD40/YVTN repeat-like-containing domain IPR001680 WD40 repeat |
| Orthology group | MCL11568 |
Nucleotide sequence:
ATGAAGATCAAAGAGTTAAAACGGACGGTGAACATGAGCTGGTCGCCAGCGGAGCTCTAT
CCCTCTATGTTGGTTACCGGCTCTGCGGCACAGCAAGTTGACGCTTCCTTCAGCTCTAAT
GCTAGCTTAGAGTTATATTCTCTTAATCTTGGTGACCCTACCTACGATTTGGAACTTAAA
TCTAGTATGCAAACAGAACATAAATTTCAGAAATTAGTGTGGTCGGGCGCTGGAGTGATT
GTTGGTGGATGTGATGGTGGACTGTTGGAGTTTTATAATGCGGAGAAACTTCTCAAGAAC
TCCTCAGAAGCCTTTGTTGGTAGCAGTACTAAACATACAGGCCAAGTGTCGGCGCTGGAT
ATTAACCCCTACCAGAAGAACCTGTTGGCTTCCGGAGCCTCTGACAGTGAGATCTTCATC
TGGGACCTCAACAACACCAGCCAGCCCATGGCGCCGGGCGCGAGGAGCGCGCCACACGAT
CATGTTCAGGGTCTAGCGTGGAACCAACAGGTCCAGCACATTCTGGGTTCGACTTTCGCA
ACACGATGTCTCGTTTGGGATTTGAGGAAGAATGAACCGATAATGAAACTCAGCGACTCC
CAGTCCGGTAGTCGCTGGCGCGCCCTGGCCTGGCACCCTCAGGTCGCCACTCAGCTGTGC
GTGGCGTCCGACCACGACCACGCGCCCGTCTTACAGCTGTGGGATCTCAGGTTGGCGGCG
TCTCCGCTGGTGACGCTGGAGGGCCACGAGAAGGGCGTGCTGTCCTTGAGCTGGAGCAAA
CACGACGAGGACCTGCTGCTGTCCGCCGGCAAGGACGGGAGCGTGCGCGTCTGGAACCCT
GCCAACACCAAGCCGGGAGGGGAGATGGTCCTGGAGGTGTGCCGTCAGTCGGGCTGGGTG
CTGGACGTGTCGTGGTCGCCGCGGACGCCCGGCCTCCTCGCCGCCGCCTCCTTCGACCAG
ACCCTGTCACTGCACACCATGCATCACGTGGCACAACCCGCCGCGATCAGCGCTCAGGGT
CAGAGCGACATAATGGATTCTTTCGGTGGGGCGGAGTCGTTCCTGTCCCTGCCGGTGGTG
AGTCCGTCCGCCCCGCCGCCCGCCCCCGCCCCGCAGGCTCACAGACCACCCAGATGGTTG
AAGCGACCCGTCCGGGCCAGGTTCGCGTTCGGTGGTAAGTTGGTGTCGTTCGAGCGTTGC
CGGCGCGAGGCGGGCGCGCAGGAGACGGTCTACATCAGTCAGGTGGTGAGCGAGCCGGAG
ATCGTGGAGAAGGCGATGGAGCTGGACAAGGTCATCGGCCTCACGCTCAGCCAGGAACCC
GACGCGACACACCGGCTGGCCGAATATTGCCGTGAGAAGGGAGACGCGGCCGTGGAGCAG
AGCGAGCGCTACGAGTGGTTCTTCCTACGAGCGAACTTCCTGCCATCATACCGGACGGAA
CTGCTGAATCTGTTAGGGTTCAAACAGGACGAGATATCGTCGAGGTTCAAAGGCCTAGCC
GTTAACAACGAGGGCCGAGCAGCGGACGCCCAGGGACTCAGCAGGACGGGCAGCACAGAG
ACTGAGGCGGAGCTGTCCACCGACACCAGCACAGACCTGTCCGACGCGCAGACCTTGATA
GAGAGGAAGCTGTCTAGTGTGGAGCTGGAGCCGAGCGTGCGGGACGTGGTCATCCCCAAC
GGAGACGACCTCACGAGTGAGATCTGTCGCTCGCTGGTGATGGGTCAGCTGGAGGAGGCG
GTGGAGCTGTGTCTGGAGGACGAGCGGGTCGCCGACGCACTCGTCATCGCCTCGCTCGGA
AGCCAAGAGTTGTTGTACAAGGTCCAGCGGTACCATCTGTATCGCACGTGTAACTCGCCC
GTGTCGCTGGTGGCGGGCGGTCTGCTAGGCGGGCGTTGGGCGGCGCTGGTGGCGGGCGCC
TCTCCCTCGTCCTGGAGGGACGTGCTGGCCGCCCTCCTCACACACTGCCACGGAGAGAGC
TTGCAACACTACTGCGAGATGTTGGGTGACAAGCTATCATCGTCATCCGAGGCGAGTCTT
CGGGAGGCGGCCGTACTGTGTTACACGTGTTGTGCGTGCGGGGAGCCGCTGTGTAGACGA
GCGCTACGATCCAGCCGGAGCCCCGCAGACCTGGCAGCCGCCGCGGAGCGAGCGCTGTTG
TTGCGTCGGGCAGCCGCGGTCAACGGTTCCGCGGCCGGCGGGTCCGCGGTGCCCGGGGGG
TCCTCTGCCGTGGACGTGTTGCTGGAGGAGTACGCAGCGAGGCTCGCGGCTCAGGGCTGC
CTGAGGAGCGCCCTGGCCGCACTGCAGGGAGCCAACACTACGCTCAATGATAGACTGGAG
GTGGCTCTAAGGATGAAGAATCAATATCACAATCGTCAGCAGCCGTCCGGCTCCCAGCAG
ACCGGCCCTCGCTCCCGGACCGTCAGCGGACACACGCACACACAGCCGCGCGGACAGTAC
ACACACACATACACACACAACGACAGCCACGCCTACAACCAACATCCGGCCGAGCCGCCC
TCATGGTCTGCTCCGCCTCGACCACTCAGTGCCACTCCACAGCCTGGTGGAATATCCGGG
AGATCTAAATACAAAGTGGATCCGTCAGTGCAGGCGGCTCCTCTCTACAACCAGTATAGC
TTCAACAACCCCGCTCCCCCGCAGCCGTCATACGGCTATAACAGTCCTCTGCCGGAACAG
TACGGGTCCCCCGCGCCCGTCAATAACTTCGCTCCCATCAACAGACCTAACCCGGTCCCG
TTAAACCCGGCTCCACTAAACCCGGCTCCACTAAACCCAGCTCCACTAAACCCAGCCCCG
CTCAGCCAGCCTCAGCCTGAGCCCATGTCCATGTCTCAGTACGCTCCCCCCCGGCCCGCC
GCCCCCGGCTGGAACGACCCCCCGATGGTCACCAACACGCATAAGCTGCAGTCCTCGCCT
GACGCGTGTCGCCTCCTGAGGTGTGTGACCGACCAGCTGAGCGAGGTGGACATGGCTCTG
TACAATGCAATTTGCCGTCGACCACCGCCACGGTTCTACGATTCAGTGGTTCCGTTCGAT
GTCGGCGACATGTCGGCCTCCCACGCCGGCACCAGGCACTGGACACAGCTCCTACAGAGT
AGACGGTCGGATGAGCCAAAGCAAGAAGTTCAGCAGCAGGCGCCCATAACACATCCGTTG
TTCGGAGTGGAGCCTCCGCAGCACGTGCCTCTGGTGCCGGCCCCGGGACAGAATCACTAC
CAGCCACAGAACCAGTTCCCTCCGGCCCAGTACCCCGGACAGTTCCAAGGACAGTATCAA
GGGCAACCGGCTCACTTCCCGGGACAGCAGGACCAATTCTCGGGACAACAACCTCCTGAC
CAGTACCAGCCGCAGTACCCTGGCGGATATCAACAGAACTACGTGCAGCAGCTGCCTCCT
CAGGCCGCCGCCCCCCCGGCCTCGGGTCCCCCGGCGCCGCCAGCCCCGGTACCCAAGCCC
CCGCTGTCGGCGGACCACGCCCCCATACAGACCGCCTTCGACGAACTCCACCGCGTGTGT
CTCGAGCGAGCACACAACACACAAATCAAGAGGAAGCTGGAGGACGTGCAGCGGCGGCTG
GAGACGCTCTACGATATATTACGCGAGAACAAGCTGTCCCCGTCAGCGCTGTCGGCGCTT
CACACGAGCGCAGCGCTGGCCGGTCGCGGGGAGGCGTCCAGCGCGCTGCAGGCGTGCTCG
GAGCTGGCGGCCGGCAGTGACTTCGCCGCGGCCGCGTCCTTCCTCCCTGGATTGAAGATG
TTGTTCCTCCTGGCGGACCAGCTGCGATGTCATTCTCATGAGTATCCTTTCCGACTGTAT
TCCTCACGTTTGTCGGCCGTGCCCGAGTCCAGTAGACTCCAAAGCCTCGGCCGACGCATA
CCGCTGCGTATCTCTGAGTTCCTCGCTGTAGCAGCGGATCATATTCTTTACGTTTACTGA
Protein sequence:
MKIKELKRTVNMSWSPAELYPSMLVTGSAAQQVDASFSSNASLELYSLNLGDPTYDLELK
SSMQTEHKFQKLVWSGAGVIVGGCDGGLLEFYNAEKLLKNSSEAFVGSSTKHTGQVSALD
INPYQKNLLASGASDSEIFIWDLNNTSQPMAPGARSAPHDHVQGLAWNQQVQHILGSTFA
TRCLVWDLRKNEPIMKLSDSQSGSRWRALAWHPQVATQLCVASDHDHAPVLQLWDLRLAA
SPLVTLEGHEKGVLSLSWSKHDEDLLLSAGKDGSVRVWNPANTKPGGEMVLEVCRQSGWV
LDVSWSPRTPGLLAAASFDQTLSLHTMHHVAQPAAISAQGQSDIMDSFGGAESFLSLPVV
SPSAPPPAPAPQAHRPPRWLKRPVRARFAFGGKLVSFERCRREAGAQETVYISQVVSEPE
IVEKAMELDKVIGLTLSQEPDATHRLAEYCREKGDAAVEQSERYEWFFLRANFLPSYRTE
LLNLLGFKQDEISSRFKGLAVNNEGRAADAQGLSRTGSTETEAELSTDTSTDLSDAQTLI
ERKLSSVELEPSVRDVVIPNGDDLTSEICRSLVMGQLEEAVELCLEDERVADALVIASLG
SQELLYKVQRYHLYRTCNSPVSLVAGGLLGGRWAALVAGASPSSWRDVLAALLTHCHGES
LQHYCEMLGDKLSSSSEASLREAAVLCYTCCACGEPLCRRALRSSRSPADLAAAAERALL
LRRAAAVNGSAAGGSAVPGGSSAVDVLLEEYAARLAAQGCLRSALAALQGANTTLNDRLE
VALRMKNQYHNRQQPSGSQQTGPRSRTVSGHTHTQPRGQYTHTYTHNDSHAYNQHPAEPP
SWSAPPRPLSATPQPGGISGRSKYKVDPSVQAAPLYNQYSFNNPAPPQPSYGYNSPLPEQ
YGSPAPVNNFAPINRPNPVPLNPAPLNPAPLNPAPLNPAPLSQPQPEPMSMSQYAPPRPA
APGWNDPPMVTNTHKLQSSPDACRLLRCVTDQLSEVDMALYNAICRRPPPRFYDSVVPFD
VGDMSASHAGTRHWTQLLQSRRSDEPKQEVQQQAPITHPLFGVEPPQHVPLVPAPGQNHY
QPQNQFPPAQYPGQFQGQYQGQPAHFPGQQDQFSGQQPPDQYQPQYPGGYQQNYVQQLPP
QAAAPPASGPPAPPAPVPKPPLSADHAPIQTAFDELHRVCLERAHNTQIKRKLEDVQRRL
ETLYDILRENKLSPSALSALHTSAALAGRGEASSALQACSELAAGSDFAAAASFLPGLKM
LFLLADQLRCHSHEYPFRLYSSRLSAVPESSRLQSLGRRIPLRISEFLAVAADHILYVY