New model in OGS2.0 | DPOGS215701  |
---|---|
Genomic Position | scaffold2679:+ 5950-6645 |
See gene structure | |
CDS Length | 309 |
Paired RNAseq reads   | 9 |
Single RNAseq reads   | 221 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003637 (2e-18) |
Best Drosophila hit   | primo-1, isoform B (4e-13) |
Best Human hit | low molecular weight phosphotyrosine protein phosphatase isoform c (3e-17) |
Best NR hit (blastp)   | acid phosphatase isoenzyme [Bombyx mori] (1e-29) |
Best NR hit (blastx)   | acid phosphatase isoenzyme [Bombyx mori] (5e-30) |
GeneOntology terms    | GO:0006470 protein amino acid dephosphorylation GO:0003993 acid phosphatase activity GO:0004726 non-membrane spanning protein tyrosine phosphatase activity GO:0005625 soluble fraction GO:0016787 hydrolase activity GO:0005737 cytoplasm GO:0042802 identical protein binding |
InterPro families    | IPR023485 Phosphotyrosine protein phosphatase I superfamily IPR000106 Protein-tyrosine phosphatase/arsenate reductase IPR017867 Protein-tyrosine phosphatase, low molecular weight |
Orthology group | ND |
Nucleotide sequence:
ATGTCTGGGCAAAAAAAGAAAGCATTGTTTATTTGTTTAGGAAATATATGCCGATCGCCG
ATAGCTGAAGGTGTGTTTCGTAAAATTGCCGACGATACATGGGAAATAGACAGTGCAGCC
ATCGGCGGCTGGCACGTCGGTAATCCGCCGGACTGGAGGGCTTTAGATACTATGAAGAAA
CATGATGTACCATATAATAATTGTGCCAGGCAGGACAGCGACTCTAAAGGGTTTGAGAAG
TGTTACGAGCAATGCGTCCGCTGCTCCCATGGTTTCTTAGAGCAGTTGGCTCAAGGGAAA
ATAAAATAA
Protein sequence:
MSGQKKKALFICLGNICRSPIAEGVFRKIADDTWEIDSAAIGGWHVGNPPDWRALDTMKK
HDVPYNNCARQDSDSKGFEKCYEQCVRCSHGFLEQLAQGKIK