| New model in OGS2.0 | DPOGS211046 |
|---|---|
| Genomic Position | scaffold40:+ 132848-154305 |
| See gene structure | |
| CDS Length | 1479 |
| Paired RNAseq reads | 137 |
| Single RNAseq reads | 633 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003797 (5e-55) |
| Best Drosophila hit | CG42313 (5e-55) |
| Best Human hit | nephrin precursor (7e-06) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC016379 [Tribolium castaneum] (6e-79) |
| Best NR hit (blastx) | GD21979 [Drosophila simulans] (5e-57) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR007110 Immunoglobulin-like IPR003961 Fibronectin, type III IPR013151 Immunoglobulin IPR008957 Fibronectin type III domain IPR013783 Immunoglobulin-like fold IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 |
| Orthology group | MCL18968 |
Nucleotide sequence:
ATGCTCAGTGATTTAATATCCCATGAATCACGATCACTCGCCGCCGTAACAAACAACTTC
GTCTATTTGAAATTTGTTTCATGTCACGTGACGTGGCTCGAGGAGCTCCGCGATAACTTA
ACGATAAGTGTGATGAGCTTCGTGCCGACTCTAGACGACGATGGTAAACCCATCACGTGT
CGCGCTGAGAACCCCAACGTCACGTCACTGTTCATGGAGACGACCTGGACTATTAACGTT
GTTTATCCTCCTGTAGTTAAACTAAGACTCGGCAGTTCACTAGCAGCTGGCGATATTAAG
GAGGGTGATGATGTCTATTTCGAATGTCACGTGAGAGCTAACCCGCCCGCAAGGAAACTG
TCCTGGCTGCATGATGCAGCCCGAGTAAGGTCTTTTCAAATTTGGTTAGGTTGGAAGAGG
AGCTTGGACGGTGGAAGTGTGTTAGATAGGGTCCCTTTAAACCTACACCTGGGTCGCAAG
TCCCAGGCACCGTTAAGGCTTCTCCCGTTAAGGCTTCTCGCCCTGCAACGCGATGGACCG
CAACGCGATGGACCTGGCACCCGCACGGATAGGCAGCTGGCACACAACGCCACCGCTCGC
GTCTTCCACAGCAACCAGAGCCTCGTGCTGCAGAAAGTAACGAGGCACAGCAGCGGACGG
TACGCTTGTTCCGCACTCAACGCCGAGGGAGAGACTGTCTCTAACGAACTGCACTTCCGA
GTCAAATTTTCACTATCTTCGACCTCACCCGCCGGCCTCACCTCAATCGGAGACTCGTTT
CAATCTACGGAAGCGATGGCCATTATAGAGATAGTTAAATTGCTAGATTCGAATACGATA
ATGCTTCCTCATTTTCCCAAACCGATGGAACGACTATTGACACATGCGCCCTCGTGTCGC
AGCGGCGGTGTGTCAGTGGTCGGCGCGGCGCGAGGCGAGTCCGTGGTCATCGTGTGCGAG
GTGGACGCGGACCCCCCTGCAGCAGTTTTTAAGTGGAAGTTCAACAACTCCGGCGAGACT
CTGGATGTGGCCGCCGACAGATACACCTCCAACGGCAGTGCTTCTAGTTTAAAATATACA
CCAGTAGCGGATTTAGACTACGGCACGCTCTCTTGCGCTGCATCCAATGAAGTGGGAGTC
CAGGTGGCTCCCTGTGTCTTTCAAATGGTCGCCGCTGGGAAGCCACACGCACCTCGTAAC
TGCACCTTATGGAACCAGACGGCCGATTCAGCTGAGGTGTCTTGTGTTTCGGGTTTTGAC
GGAGGACTACCGCAGCACTTTTTACTTGAGGTGTACTCCGGGAACGAAGATAAGCCCAGA
GTGAACCTCACAGCCGAGGAACCTGTTTGGACGGTGCGAGGGCTGGAGTGGGACGTGCGA
TTCAGGCTGGTGGCTGTAGCCGTCAACAGCAAGGGCCGCTCGGCGCCAGCGCGGCTCGAT
GATCTTCTGTTCCCCGACCCGGAGAAGAGAACCGGTTAG
Protein sequence:
MLSDLISHESRSLAAVTNNFVYLKFVSCHVTWLEELRDNLTISVMSFVPTLDDDGKPITC
RAENPNVTSLFMETTWTINVVYPPVVKLRLGSSLAAGDIKEGDDVYFECHVRANPPARKL
SWLHDAARVRSFQIWLGWKRSLDGGSVLDRVPLNLHLGRKSQAPLRLLPLRLLALQRDGP
QRDGPGTRTDRQLAHNATARVFHSNQSLVLQKVTRHSSGRYACSALNAEGETVSNELHFR
VKFSLSSTSPAGLTSIGDSFQSTEAMAIIEIVKLLDSNTIMLPHFPKPMERLLTHAPSCR
SGGVSVVGAARGESVVIVCEVDADPPAAVFKWKFNNSGETLDVAADRYTSNGSASSLKYT
PVADLDYGTLSCAASNEVGVQVAPCVFQMVAAGKPHAPRNCTLWNQTADSAEVSCVSGFD
GGLPQHFLLEVYSGNEDKPRVNLTAEEPVWTVRGLEWDVRFRLVAVAVNSKGRSAPARLD
DLLFPDPEKRTG