| New model in OGS2.0 | DPOGS202485 |
|---|---|
| Genomic Position | scaffold4423:- 4707-8087 |
| See gene structure | |
| CDS Length | 1662 |
| Paired RNAseq reads | 47 |
| Single RNAseq reads | 143 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013789 (5e-174) |
| Best Drosophila hit | CG9518 (5e-111) |
| Best Human hit | choline dehydrogenase, mitochondrial precursor (2e-54) |
| Best NR hit (blastp) | PREDICTED: similar to CG9517-PB, isoform B [Apis mellifera] (1e-155) |
| Best NR hit (blastx) | PREDICTED: similar to CG9517-PB, isoform B [Apis mellifera] (2e-152) |
| GeneOntology terms | GO:0008812 choline dehydrogenase activity GO:0006066 alcohol metabolic process GO:0050660 FAD binding |
| InterPro families | IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal IPR012132 Glucose-methanol-choline oxidoreductase |
| Orthology group | MCL16728 |
Nucleotide sequence:
ATGCACCTATCTCCCTCGTTCCGTGATCTCACTTGCATGCTCGGCTCCGACGTGCTCTTG
TTGGAAGCCGGTCCTGAAGAGCCAGACGTAACGATGGTGCCTTCATTAGCGACGATTCTA
AGACAATCTTCTATTGACTGGCGGTATGAAACACAACCCGAACCCTTGACCTGTAGGTCT
TATAGAAGCCGATCCTGTCCATGGACCAGAGGTAAAACAATGGGTGGTTCCAGTGCCATA
AACTATTTAGTTTACATGAGAGGTAACAGATATGATTATGATAACTGGGCTAATTTAGGA
AACCCTGGCTGGAGTTATAATGAGTTGCTGCCTTACTTTAGAAAATCTGAAAACAACCGT
GATGTTGAATCTTATGACAATTTCCTTCATGGAGTAGGGGGACCTATTACTGTGGAGAGA
TTTCCATATGTTGATATCAATACTGCTAAATTAGTAGCAGCATTTCAAGATAAAGGGCTT
CCATTAATAGATTTGACGTCAGAAAATAACTTAGGTACAAATATAGGACTATCAACTTCC
AGAGATGGGCGAAGGATGTCTATAAATGTGGCATATATCAAGCCCATACGTGATGTTAGA
CCAAACATTGATATAGTGGTCAACGCATTTGCTACTACGTTAATAATAGACCCCCAAACA
AAAATGGTTCTTGGGGTTACATATATAAAGAATGGTGTTACATATAACGTTTTTGCAAAG
AAAGAAGTAATAGTAAGTGCTGGGACAATAAATTCTCCAAAATTACTTATGCTTTCTGGG
ATCGGCCCAAAAGAGCATTTGCAAAGCTTGAATATACCAATAATATCGGAATTGGCAGTC
GGCCAAAATTTACAAGATCACACAACCACTGACGGACTAACTATTGCTTTATCAAATAAG
ACATCTACCTTAGTGAGTACTGAGACACTCCTTAATGAAGTACAGAATTACCACCAACAG
GACCCTAAAAAAGATGGACCTTTGGCGACAACTAATACTCTTAATGCCATTGCTTTTATC
AAAACTAAATATGCGACTGTAAATGCACCAGATATACAATTTCATTTTGATGGAAGAAAT
GTTGAAGACTTTTACGCAGATCCTCAAACATATTTGGAAACCAACATTTGGCCTTTAGCT
TTTTATAATGGTTTATCAGCAAGACCACTTCTGCTTACCCCCAAAAGTAGGGGAGTTATT
TTACTAAACCATACTGATCCTATCTTTGGCACACCTTTAATATACCCACGCTTTTTCACA
GTCAAGGAAGACTTAGATGCGTTAATCGAAGGATTACGTTTTGCTGTAAGTTTAGAGGAA
ACTGAAACATTTAAAAGCATTGGTGCACATTTTGTTAGAGTTCCTGTTAAGAATTGTGAA
AATCATATTTGGGGTTCTTATAATTATTTTGCGTGTTTACTTATTGAGTATACTTCAACA
ATTTACCATCCAGTTGGTACTTGTAAGATGGGTCCCGCTTGGGACAAAGATGCTGTTGTT
GACTCAAGATTGCGAGTGTATGGGGTTAAACGATTAAGAGTAATTGACGCATCCATAATG
CCAGAAATAGTTAGAGGGAACACAAATATCCCAACTGTCACCATAGCAGAACGTGCATCA
GATATGATAAAGGAAGAATATTTGACAAAACAACATTTATAA
Protein sequence:
MHLSPSFRDLTCMLGSDVLLLEAGPEEPDVTMVPSLATILRQSSIDWRYETQPEPLTCRS
YRSRSCPWTRGKTMGGSSAINYLVYMRGNRYDYDNWANLGNPGWSYNELLPYFRKSENNR
DVESYDNFLHGVGGPITVERFPYVDINTAKLVAAFQDKGLPLIDLTSENNLGTNIGLSTS
RDGRRMSINVAYIKPIRDVRPNIDIVVNAFATTLIIDPQTKMVLGVTYIKNGVTYNVFAK
KEVIVSAGTINSPKLLMLSGIGPKEHLQSLNIPIISELAVGQNLQDHTTTDGLTIALSNK
TSTLVSTETLLNEVQNYHQQDPKKDGPLATTNTLNAIAFIKTKYATVNAPDIQFHFDGRN
VEDFYADPQTYLETNIWPLAFYNGLSARPLLLTPKSRGVILLNHTDPIFGTPLIYPRFFT
VKEDLDALIEGLRFAVSLEETETFKSIGAHFVRVPVKNCENHIWGSYNYFACLLIEYTST
IYHPVGTCKMGPAWDKDAVVDSRLRVYGVKRLRVIDASIMPEIVRGNTNIPTVTIAERAS
DMIKEEYLTKQHL