| New model in OGS2.0 | DPOGS208114 |
|---|---|
| Genomic Position | scaffold61:- 154867-171760 |
| See gene structure | |
| CDS Length | 1626 |
| Paired RNAseq reads | 1367 |
| Single RNAseq reads | 3552 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006767 (0.0) |
| Best Drosophila hit | ecdysone receptor, isoform G (2e-158) |
| Best Human hit | oxysterols receptor LXR-alpha isoform a (7e-66) |
| Best NR hit (blastp) | ecdysteroid receptor EcR-B [Choristoneura fumiferana] (0.0) |
| Best NR hit (blastx) | ecdysteroid receptor EcR-B [Choristoneura fumiferana] (0.0) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR000536 Nuclear hormone receptor, ligand-binding, core IPR001628 Zinc finger, nuclear hormone receptor-type IPR008946 Nuclear hormone receptor, ligand-binding IPR003069 Ecdysteroid receptor IPR001723 Steroid hormone receptor IPR013088 Zinc finger, NHR/GATA-type |
| Orthology group | MCL10717 |
Nucleotide sequence:
ATGAGACGACGCTGGTCTAACAACGGAGGGTTTCCGCTGCGAATGCTCGAGGAGAGCTCC
TCAGAGGTTACATCTTCGTCGGCTCTAGGATTACCTCCTGCTATGGTAATGTCTCCGGAG
TCGCTCGCCTCGCCAGAGTATGGCGGGCTCGAGCTATGGGGTTACGACGACGGAATCACA
TACAACACAGCACAGTCGTTGCTCGGGAACACATGCACGCTGCAACAGCAGCAGCCGCCC
ACGCAACCCTTACCTTCCATGCCGCTGCCGATGCCGCCCACGACGCCCAAATCGGAAAAT
GAATCCATATCATCAGGACGCGAGGAGTTATCACCGGCGTCTAGCGTGAACGGCTGCAGC
ACAGATGGAGAAGCAAGGCGGCAAAAGAAAGGTCCTGTGCCTCGCCAACAAGAGGAGCTT
TGTCTCGTGTGTGGTGACAGAGCTTCCGGTTACCATTACAATGCACTTACCTGCGAAGGC
TGTAAAGGTTTCTTTAGGCGGAGTGTTACCAAAAACGCTGTATACATTTGCAAGTTTGGT
CACGCGTGCGAAATGGATATGTATATGAGGAGAAAATGTCAAGAGTGCAGATTAAAGAAA
TGTCTAGCGGTGGGCATGAGGCCGGAGTGTGTGGTGCCAGAGAACCAATGTGCGATCAAG
AGGAAAGAGAAAAAGGCGCAAAGGGAGAAAGACAAACTGCCAGTCAGCACAACGACAGTG
GACGACCACATGCCGCCCATAATGCAATGTGATCCGCCTCCACCTGAAGCCGCGAGGATT
CACGAAGTGGTGCCGCGGTTCCTCTCAGAGAAGCTGTTGGAGCAAAACCGGCAGAAGAAC
ATCCCCGCGCTCACCTCCAATCAACAATTCTTGATTGCGAGGCTCGTCTGGTACCAGGAC
GGCTACGAGCAGCCGTCGGAAGAGGATCTCAAAAGGGTGACCCAGACTTGGCAGCAAACA
GATCAAGATGACGAAGATTCCGATATGCCATTCCGTCAGATCACAGAAATGACGATCTTG
ACAGTACAACTCATCGTCGAGTTCGCCAAGGGGCTGCCGGGGTTCGCCAAGATATCACAG
CCGGATCAAATCACACTATTAAAGGCTTGTTCAAGCGAGGTGATGATGTTGCGGGTAGCA
CGACGATATGACGCCGCGACTGACAGTGTACTGTTCGCAAACAACCAGGCGTACACCCGC
GACAACTATCGCAAAGCCGGCATGGCGTATGTCATAGAAGACCTGCTGCACTTCTGCCGC
TGCATGTACGCCATGTCCATGGATAACGTACACTATGCGTTGCTTACTGCCATTGTTATA
TTCTCAGACCGACCGGGTTTGGAGCAACCTCAGCTGGTGGAGGAGATCCAGCGCTACTAC
CTGAACACGCTGAGGGTGTACATCATGAACCAGCTGAGCGCCTCCTCGCGCTGTCCGGTC
GTTTACGGCAAAATCCTGTCCATCCTGTCCGAGCTCAGGACCCTCGGCATGCAGAACTCG
AACATGTGCATCTCGCTGAAGCTGAAGAACAGGAAGCTGCCGCCATTCCTCGAGGAGATC
TGGGACGTGGCGGACGTGTCCACAGCGCAGCCGCCGCCCATCGTCGACAACCCCGTCGAC
CTCTAG
Protein sequence:
MRRRWSNNGGFPLRMLEESSSEVTSSSALGLPPAMVMSPESLASPEYGGLELWGYDDGIT
YNTAQSLLGNTCTLQQQQPPTQPLPSMPLPMPPTTPKSENESISSGREELSPASSVNGCS
TDGEARRQKKGPVPRQQEELCLVCGDRASGYHYNALTCEGCKGFFRRSVTKNAVYICKFG
HACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAIKRKEKKAQREKDKLPVSTTTV
DDHMPPIMQCDPPPPEAARIHEVVPRFLSEKLLEQNRQKNIPALTSNQQFLIARLVWYQD
GYEQPSEEDLKRVTQTWQQTDQDDEDSDMPFRQITEMTILTVQLIVEFAKGLPGFAKISQ
PDQITLLKACSSEVMMLRVARRYDAATDSVLFANNQAYTRDNYRKAGMAYVIEDLLHFCR
CMYAMSMDNVHYALLTAIVIFSDRPGLEQPQLVEEIQRYYLNTLRVYIMNQLSASSRCPV
VYGKILSILSELRTLGMQNSNMCISLKLKNRKLPPFLEEIWDVADVSTAQPPPIVDNPVD
L