New model in OGS2.0 | DPOGS208115  |
---|---|
Genomic Position | scaffold61:- 139757-142264 |
See gene structure | |
CDS Length | 960 |
Paired RNAseq reads   | 612 |
Single RNAseq reads   | 1961 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006768 (2e-57) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | C-type lectin 10 [Bombyx mori] (1e-91) |
Best NR hit (blastx)   | C-type lectin 10 [Bombyx mori] (6e-94) |
GeneOntology terms    | GO:0005529 sugar binding GO:0005488 binding GO:0016020 membrane GO:0004872 receptor activity GO:0016021 integral to membrane GO:0006897 endocytosis |
InterPro families    | IPR001304 C-type lectin IPR016187 C-type lectin fold IPR018378 C-type lectin, conserved site IPR016186 C-type lectin-like |
Orthology group | MCL31014 |
Nucleotide sequence:
ATGTCTGCTAAACTCATTGTTACATTGTTTTGCGTACAATATATATTTTTAATGAATTGC
CAAGAAGTGGCGAAGTTCTTCCGTAAAGACTACGTCTACATTGACAGCACAAAGTCTTTT
TACAAAATCCATACGATACATCGGGCGTGGGAAGATGCTAAGGAAATGTGTGACTTCGAA
GGGGCGACGTTGTTTTATCCATACGATGAAGACGAAGCCAAAGCCGTCATAAATTACTGG
AACCAGACCCTTCCGTTCCCATGGATATTTATAGGTGTATCCACACCCAACGTTAGGGAA
GTTTTTGAAACGGTAGACGGTTTATCTATATCTCAGGTATACGATAATTGGGGTCGAGGA
GAGCCTAACAACGCCGGTGGGACCGAAGGCTGTGTAGTTTTGAGAAAGGACGGCACCCTT
AATGATGACAAATGTGCCGGAAAATTGCCTTTCATTTGTAAGAAAACGTTAAATACTTTG
GAATGGAACATGCTCTGTGATTTACCTGATATGGGATACGTATACAATGAACTAGGGAGA
TGCTATAAATTCCACTTGAACCCTCGGAGTTGGTATGAAGCCGTCAAAATCTGTGATGCA
GAACAATCGTACCTCGCTATCATAAATTCAGATGCAGAAGCAGATGTCTTGGTTAACATC
ACAAAAAACGCTCCAAAAGACGACATCGAGGACACAAATTACCTGAATGGAGCCGTTCAT
TTAGGATTTAAATTTAACCACATTTGGAAAACTATCAAACATGAATCATTAAGGCGGAGC
GGGTATTCACAATGGGGAGTCGGCCAGCCGGATGGAAAGGGTAAAGAAACATGTGGCTCG
ATGTTTTTCAATGGAAAACTGAATGACATATCCTGCGACCTGAGATGTTTCTTTATTTGT
GAACACGAACCCGCCATCTTGACGACGGAATACGACTTCAGGTTTGGTCGCCCTAATTAG
Protein sequence:
MSAKLIVTLFCVQYIFLMNCQEVAKFFRKDYVYIDSTKSFYKIHTIHRAWEDAKEMCDFE
GATLFYPYDEDEAKAVINYWNQTLPFPWIFIGVSTPNVREVFETVDGLSISQVYDNWGRG
EPNNAGGTEGCVVLRKDGTLNDDKCAGKLPFICKKTLNTLEWNMLCDLPDMGYVYNELGR
CYKFHLNPRSWYEAVKICDAEQSYLAIINSDAEADVLVNITKNAPKDDIEDTNYLNGAVH
LGFKFNHIWKTIKHESLRRSGYSQWGVGQPDGKGKETCGSMFFNGKLNDISCDLRCFFIC
EHEPAILTTEYDFRFGRPN