| New model in OGS2.0 | DPOGS208126 |
|---|---|
| Genomic Position | scaffold61:+ 65007-67601 |
| See gene structure | |
| CDS Length | 1173 |
| Paired RNAseq reads | 12 |
| Single RNAseq reads | 27 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001404 (2e-08) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to polyprotein [Acyrthosiphon pisum] (4e-36) |
| Best NR hit (blastx) | PREDICTED: similar to polyprotein [Acyrthosiphon pisum] (7e-47) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003964 RNA-directed DNA polymerase activity GO:0003723 RNA binding |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | ND |
Nucleotide sequence:
ATGAATGTACGCGGCGCGTGTGAAGTCGGTAACGCGGTTCGCGGGATACTGACAGCCTCC
GTTCTCCGAGGGGCGAGCCTGCGCGGTCCAAATCCGTCTAGAAATACACAGCACGCAGAA
ATAGTTCAGCAGCTACTGAGGAGCTACGTTGAGCAGACGATAGCCCCAGAGAAAGACCCC
ATCGTCCTCTCCCCTGGCCAAGTGCAGCGTATGATTCGCCGCACTAAGCTTCGAAAGGCC
CCGGTTCTGACAGAATCACTAACGAAGTTCTCCGTCACATTTCTGCGCGTAGCACAGCAG
CGGCGACGCGCTTACATAATAGAGTCCTCAGGACCGGCCACTTCCCTATCCAATGGAGGC
TCGGCCGAGTCATCATGCTGCCGAAGCCTGGGAAGAACATCTTGCTGCCAGGGAGCTGTC
GCCCCATCACGCTGCAGTCAACCGTCTCGAAGGTTTTCGAGAAACTTCTGCTGCTGCACC
TCACACCACCCGTCCCACCACGCAATGAACAGTTTGCCTTCAGAGTTGAGCACTCAACCA
CGCTCCACAGCGCTCGCGAGGGTCCTGCACGTCCTCTCGGTGGCTCTCGACAAAAACGAG
TCAGCCGTCGCAGTGACGCTCGATATGGGGAAAGCTTTCGATCGCGTATGGCACCCCGGC
CTATTGTACAAGCTGGCCACATTCACTACTCCTCGCCGAATAGTCAGGATTATGGCCACC
TTCCTGCGGGACAGGCCTTTCCAGGTGTCGGTGAAACCCACCCCATCCACGGAACGCCCC
ATCAGAGCCGGAGTACCGCAGGGGAGCTGCCTGTTTCCGATATGTCACTCCAACTATACG
GATGACATCCCAGTGGCGGAACGTGCGACCTTAGCACTCTACGCCGACGACGCTGCCTAC
ATTACAACATCTCTGACTCCCGCCCACGCGGCGATGAAAATGCAGCGTCATATTGACCAG
CTCCCTCAGTGGCTGGATAAATGGCGTCTCAAAGTGAAGGTCTCGAAGACCCAGGCGATT
TCCATGGGTCGGCGACACCTACCGCAGCTGGCTGGCTGGCTCGAGCGGGGTAGCGGCGAG
AAGAGCCGAAAAGAAGAGAGACCACAAGAAGATGACCCCATCGGACGCCGGCTGGATTCT
AACCACCGGGGACGTGTCCTCGCCCACAGTTAG
Protein sequence:
MNVRGACEVGNAVRGILTASVLRGASLRGPNPSRNTQHAEIVQQLLRSYVEQTIAPEKDP
IVLSPGQVQRMIRRTKLRKAPVLTESLTKFSVTFLRVAQQRRRAYIIESSGPATSLSNGG
SAESSCCRSLGRTSCCQGAVAPSRCSQPSRRFSRNFCCCTSHHPSHHAMNSLPSELSTQP
RSTALARVLHVLSVALDKNESAVAVTLDMGKAFDRVWHPGLLYKLATFTTPRRIVRIMAT
FLRDRPFQVSVKPTPSTERPIRAGVPQGSCLFPICHSNYTDDIPVAERATLALYADDAAY
ITTSLTPAHAAMKMQRHIDQLPQWLDKWRLKVKVSKTQAISMGRRHLPQLAGWLERGSGE
KSRKEERPQEDDPIGRRLDSNHRGRVLAHS