| New model in OGS2.0 | DPOGS213184 |
|---|---|
| Genomic Position | scaffold188:+ 174505-179296 |
| See gene structure | |
| CDS Length | 1896 |
| Paired RNAseq reads | 505 |
| Single RNAseq reads | 1189 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007372 (1e-169) |
| Best Drosophila hit | kelch, isoform A (5e-115) |
| Best Human hit | kelch-like protein 3 (2e-109) |
| Best NR hit (blastp) | putative kelch-like protein 1 [Anopheles stephensi] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to Ring canal kelch protein [Apis mellifera] (3e-135) |
| GeneOntology terms | GO:0048477 oogenesis GO:0007297 ovarian follicle cell migration GO:0007301 female germline ring canal formation GO:0035183 female germline ring canal inner rim GO:0045172 germline ring canal GO:0003779 actin binding GO:0005938 cell cortex GO:0007303 cytoplasmic transport, nurse cell to oocyte GO:0007300 ovarian nurse cell to oocyte transport GO:0030036 actin cytoskeleton organization GO:0030717 karyosome formation GO:0030723 ovarian fusome organization GO:0007349 cellularization |
| InterPro families | IPR006652 Kelch repeat type 1 IPR011705 BTB/Kelch-associated IPR013069 BTB/POZ IPR011333 BTB/POZ fold IPR000210 BTB/POZ-like IPR015916 Galactose oxidase, beta-propeller IPR017096 Kelch-like protein, gigaxonin |
| Orthology group | MCL12433 |
Nucleotide sequence:
ATGGAAGGCAACGGGGACGCAGACAGGGACCGAGGCTCGGGTAGCGTGGAGCACAGCGCA
GCAGAGGGGGACGGAGACAGGGGCAGGTACAGCTTGGTGCGGTGCGCGTCGCAGTCCTCG
CTGGACGAATGTTCTCAACGTCGTGGCGCGGGCGAGGCGGGCGAGGCCGCTGCGGGGGCC
GTGCACGCCGCCTCCTTACTGCACTCGCTGTCGCGACTCAGGAGAGACGATGTGCTCTGC
GACGTGCGGCTCGTGGCCCAGGCGCCGGGGGAGGCGGCCCAGTCCGCGGAGTCGGGCGAG
GCGGTCGGCGTGTGCGCGCACCGTGCCGTGCTGGCCGCGTGCTCGCCGTACTTCCGGGCC
ATGTTCACTCAGTTCGATGAGCGGACTCAGGCCGTCATCACCATACAGGACGTGGAGCCG
TCGGCGCTGGCGGCCATAGTCGAGTACGTGTACTCTCCGGAGTCTCTGGTGATGACGGAA
GACTCGGTCCAGTCCCTACTGTCGGCGGCGTCACTGCTGCAGGTGAGGGGAGTGCGCGCC
GCCGCCTGCTCCTTCCTCGCAGCGGCGCTGGCTCCGGACAACGCTCTCGGCATCAGAGCC
TTCGCCGACCTCCACGCCTGCGCCGACCTGGCCGACGTCGCCGACCGGTTCGTCAAGAGA
CACTTCGTGGAGGTTCTCGAATCGGAGGAGTTCCTGGCGCTGGACTGCGACGTGCTGGCC
GCGCTGCTGGACTCGGACAGGATCACCGTCCCCAACGAGGAGCTCGTCCTGGACGCCGTC
ATACGATGGATGCAGCACGACCCTGAGAACCGCCGCTGTCGTCTGGGAGCTCTGCTGGAG
CACGTCCGTCTGCCGCTCCTCCCGCAGGACGTGTTGGTGGCGCGTGCGGCCGCCGAGCCT
CTCGCCTCCGCCGAGCTGCGGGTCAAGGACCTGGTCATCGAGGCTTTGTCGTTTCATCTC
CTCCGTCCGGAGCGTCGTGCCGCCGCAGCAGCGGCGAGCGCCCGTGCCCGTCCCCGGCAG
CCTCCCCGCTCGCCCAAGGTTCTACTGGTGGTGGGCGGGCAGGCTCCCAAGGCCATCCGA
GACGTGGAGGCCTTTCACATGGAGAGCGGGCGGTGGCGGGCCGCGGCCGAGCTGCCGACC
CGCCGCTGTCGCGCCGGCCTCGCCGCCGTGGGCGCGCGGCTGTACGCCATCGGAGGCTTC
AACGGAACCCTGCGCGTCCGCAGCGTGGACGTGTACGACGTGGGCGCCGACGCGTGGTCG
CCCGGGCCGCCGCTCTGCGCTCGGCGGTCGACGCTGGGAGTCGCCGTCGTGGGGAACGTT
ATCTACGCCGTGGGAGGCTTCGACGGAGCGACCGGGCTGAGCTCGGCGGAGGCGCTGGAC
GTCCGCGAGGGCGTATGGCGCTCCATAGCCAGCATGAGCACGCGGCGGTCCAGCGTGGGC
GTGGCGGCGCTCGACGGGAAGCTGTACGCGGTCGGAGGTTACGACGGTGCGTCCCGCCAG
TGTCTGCACACCGTGGAGCGATACGACCCCGCCGCGGATGCCTGGGAGCCGGTCGCCGAG
ATGGCGGCGCGGCGCTCCGGCGCCGGCGTGGGCGTGGCCGGAGGCGCGCTATACGCCCTC
GGCGGACACGACGGGCCGGCCGTGCGCCGCTCTGTGGAGCGCTACCGGGAGCGCGACGGC
TGGGCCCCGGCGCCTCCCATGACGCACGCGCGAAGGAACGCCGGCGTCGCCTCACACCAC
GGCCGCCTGTACGTGGCCGGCGGGGACGACGGCGCCGCCAACCTCGCCACCGTGGAGGTG
TTCGACCCCGCCACGGAGCAGTGGTCGATGCTGAGCTCCGCGATGTCCGTGGCTCGCTCG
TACGCGGGGGTGGCGGTGGTGGAGCGAGCTGCCTGA
Protein sequence:
MEGNGDADRDRGSGSVEHSAAEGDGDRGRYSLVRCASQSSLDECSQRRGAGEAGEAAAGA
VHAASLLHSLSRLRRDDVLCDVRLVAQAPGEAAQSAESGEAVGVCAHRAVLAACSPYFRA
MFTQFDERTQAVITIQDVEPSALAAIVEYVYSPESLVMTEDSVQSLLSAASLLQVRGVRA
AACSFLAAALAPDNALGIRAFADLHACADLADVADRFVKRHFVEVLESEEFLALDCDVLA
ALLDSDRITVPNEELVLDAVIRWMQHDPENRRCRLGALLEHVRLPLLPQDVLVARAAAEP
LASAELRVKDLVIEALSFHLLRPERRAAAAAASARARPRQPPRSPKVLLVVGGQAPKAIR
DVEAFHMESGRWRAAAELPTRRCRAGLAAVGARLYAIGGFNGTLRVRSVDVYDVGADAWS
PGPPLCARRSTLGVAVVGNVIYAVGGFDGATGLSSAEALDVREGVWRSIASMSTRRSSVG
VAALDGKLYAVGGYDGASRQCLHTVERYDPAADAWEPVAEMAARRSGAGVGVAGGALYAL
GGHDGPAVRRSVERYRERDGWAPAPPMTHARRNAGVASHHGRLYVAGGDDGAANLATVEV
FDPATEQWSMLSSAMSVARSYAGVAVVERAA