New model in OGS2.0 | DPOGS200439  |
---|---|
Genomic Position | scaffold451:- 63188-70507 |
See gene structure | |
CDS Length | 2148 |
Paired RNAseq reads   | 761 |
Single RNAseq reads   | 2071 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008897 (0.0) |
Best Drosophila hit   | Optix-binding protein (2e-71) |
Best Human hit | zinc finger protein 226 isoform a (4e-38) |
Best NR hit (blastp)   | PREDICTED: similar to Optix-binding protein CG30443-PA [Tribolium castaneum] (7e-107) |
Best NR hit (blastx)   | PREDICTED: similar to Optix-binding protein CG30443-PA [Tribolium castaneum] (8e-110) |
GeneOntology terms    | GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003676 nucleic acid binding |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
Orthology group | MCL17468 |
Nucleotide sequence:
ATGGGAGACTTCGTTTTTTACTGTTCCCTTTGCTGCAATGCCACATTTGATTCTAAGAAA
TCTCTTATTGATCATTTGTCCCAAATATCTTTAAATTTAGGTTGTCCGATATGCGTTAAA
AAGTTCTCGTCGATAGAAGATCTGGTAGAACACTTAAAAGATGACGATTGTGACGTTAAA
TCCGTTAACTTGGAAATCAATGATCATGATGAGACCAATGGTGTTAGTAAGGAGGTCCAA
ACAGACGCGTCTTCCTATTCAGAGCCAAATACTATAAATGATGTTGATGATGATGATAAA
ATGTATGTCGAAGTACTCAGCAAGCAAATGATGAAACCATGCCTACAAACACAGGAGTTG
AAATTAGTTAAGGAGCATGGCGAGAGTCGTTATGTGATTGTCACCGATGATGATTTGTCA
TTAAATTCTGGAATTACAATAGTCACTAAACAAAATAAAGATGGAACCATATCTTTGACA
ACACAAGAATCCCTCAATGTGTCAAGCGCAGAGACAGGAATAGAAATAGAGGAGACAGAT
GAAAAGAATGAAACCGTAAAGAATGAAACAGAAAGTTCCCAAGAGGAGAGATACAGCTGT
AACACCTGTGATATGACATTCACATCGGTTCTAGAACACATACAGAACTACCACAACGAT
CAGGATGTTGTGGTCGAGGAGCCGTTGGATGAAAATTCACAAGAAATTAACCTGGAATTT
GATCAAACGGAAAATGAAGATGTGATAGAGAAACAGACGTCACGCAGAATGATAACGGAC
ACGGGAGATATCATAGAGACCCCGATTACTGAAGAAATTGACACTGAAATGGAAGAAATG
AAACAAGCAAACAATAGACGATATAAGAAAATAGATCAATTCTGTAACAGCATTGTTAAA
GACATTAAAAACGATGATACCAAGAACGGTCCGTACCACAAGGTTGTTATAAAGGAGGTG
CAGACCACGGCCGGCAACAAAGTCAAAGTATACAATTGTATGTCATGTAATGTATATGTG
ACGACACTATCGGAATTCAAGCAGCATCCCTGTAAGATTTTAAAATACCCGTGTTCGCAA
TGTCCAGTGGCATATGAGAATTCAAAGTCTCTCTGCGCCCATATGAAGGTTCACAAAATA
AGGAGTACAGAAATAACAGCGGCCATAACGAAACACGAGTGCGAAGTCTGCAACACGATA
TTTCCATCGAGCAAGTCGTTGAAACTCCATAAAAGAATGCACGATCCCGTCAAGTCACGT
CCATTGGGTCCCCAAGAGTCGGAAGACGGTACGACTGATAACGTAGAAAAATTCCTGTGC
AACGTCTGCAATAAATTGATACCCGAGAACTATAGGACCATACATCAGAACTCGCACAAG
AGCAGCAACAAGATGAACTGCGACATATGCAACAAGAAGTTCCTGTCCAAAGAAAACTTG
GAGATGCACATGGGCGTGCACAACCTGGATAAGATAACCATCGGCAAACAGGATAAGGCG
TTGCCGTACGAGTGTTTGTATTGTAACAGAAAATTCGGAAGACCGCACGAGAAGGTCAAA
CACGAGAGAATACACACGGGTGAGAAGCCCCACTCGTGTGATATCTGCGGCAAGTCTTTC
CGAGTCTCGTACTGTCTGACGCTACACATGCGCACGCACACGGGCGCGCGGCCGTACGCG
TGTCCGCACTGTAACAAGAGGTTCAAAGCCCACAGCGTGTACAACCACCACCTGCTGACG
CACTCCGACGTGCGCGCGTACAAGTGTCCGTACTGTCCGAAGGCCTTCAAGACGTCGGTG
CAGTTGGCGGGGCACAAGAACTCGCACACCAAGCCCTTTTCATGCCAACAGTGCAATAGG
CCTTTCGCTTCTTTATACGCTGTCCGAGTCCACATGGAGATACACAGCCGTCAGAATAGT
CTCAAATTTTCATGTACCATGTGCGGCGCGAGCTACGCTAGGGCCTTCGCCCTCAAGGAC
CACGTGAGGCAGGCGCATAAAGATGTGGCGCCGATGGTTAAAGATGAGGAGTGGATGAGA
ACAGAGAACAGCGCCAACGTGGAAACAGACGACATACAGCTGAACAAGGACTTCCCACAG
GATATAAACGAACTGGGCACCTACGAGACGGAGTTGATAATACCTTGA
Protein sequence:
MGDFVFYCSLCCNATFDSKKSLIDHLSQISLNLGCPICVKKFSSIEDLVEHLKDDDCDVK
SVNLEINDHDETNGVSKEVQTDASSYSEPNTINDVDDDDKMYVEVLSKQMMKPCLQTQEL
KLVKEHGESRYVIVTDDDLSLNSGITIVTKQNKDGTISLTTQESLNVSSAETGIEIEETD
EKNETVKNETESSQEERYSCNTCDMTFTSVLEHIQNYHNDQDVVVEEPLDENSQEINLEF
DQTENEDVIEKQTSRRMITDTGDIIETPITEEIDTEMEEMKQANNRRYKKIDQFCNSIVK
DIKNDDTKNGPYHKVVIKEVQTTAGNKVKVYNCMSCNVYVTTLSEFKQHPCKILKYPCSQ
CPVAYENSKSLCAHMKVHKIRSTEITAAITKHECEVCNTIFPSSKSLKLHKRMHDPVKSR
PLGPQESEDGTTDNVEKFLCNVCNKLIPENYRTIHQNSHKSSNKMNCDICNKKFLSKENL
EMHMGVHNLDKITIGKQDKALPYECLYCNRKFGRPHEKVKHERIHTGEKPHSCDICGKSF
RVSYCLTLHMRTHTGARPYACPHCNKRFKAHSVYNHHLLTHSDVRAYKCPYCPKAFKTSV
QLAGHKNSHTKPFSCQQCNRPFASLYAVRVHMEIHSRQNSLKFSCTMCGASYARAFALKD
HVRQAHKDVAPMVKDEEWMRTENSANVETDDIQLNKDFPQDINELGTYETELIIP