| New model in OGS2.0 | DPOGS200440 |
|---|---|
| Genomic Position | scaffold451:- 39427-41236 |
| See gene structure | |
| CDS Length | 1593 |
| Paired RNAseq reads | 126 |
| Single RNAseq reads | 394 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008898 (0.0) |
| Best Drosophila hit | CG3238 (2e-161) |
| Best Human hit | ATP-dependent DNA helicase PIF1 (3e-117) |
| Best NR hit (blastp) | GJ24695 [Drosophila virilis] (0.0) |
| Best NR hit (blastx) | GI17040 [Drosophila mojavensis] (2e-167) |
| GeneOntology terms | GO:0017111 nucleoside-triphosphatase activity GO:0000166 nucleotide binding GO:0003677 DNA binding GO:0005634 nucleus GO:0016787 hydrolase activity GO:0004386 helicase activity GO:0005524 ATP binding |
| InterPro families | IPR010285 DNA helicase PIF1, ATP-dependent IPR003593 ATPase, AAA+ type, core |
| Orthology group | MCL15462 |
Nucleotide sequence:
ATGACTGGCGATAAAGAGCAAGGCATTAATAAAACACCATCGAAGCAAAGTGTGAGAACG
AAATTATTAAGTGGCAAGGCTAAGGCATTTGAAGATATAAGCCCAGTTACGGTAGCGGAT
ATATGCCAGGCTAAAAGTAAGATCAGTAAGGCGACTACAACAACTCCGTCTCCACCTTCC
AAGAAGAGAAAGTTTGATGAAGCAATCAAAGGACCAGCTCCAAAGAAACTGTACTCTCCT
TCACCACTTTCAACCACAAGTTCATTAAATGAAGAACAAACACGAGTGTTGGAAGCTTGT
CTTAGTGGAAAAAATATATTCTTTACTGGTTCTGCAGGCACAGGGAAGAGTTTCTTGTTG
AAAAGAATAGTAGCAGCTTTACCACCAGACGTAACAATGGCCACTGCTTCCACTGGAGTT
GCCGCTTGTCATATAGGTGGGACCACCCTTCATGCATTTGCTGGCATTGGAGATGGTAGT
GGTACTGTAGAAAAGTTGTGTGAGCGAGCAATAAAATCACCACTAGTTGCACAAAAGTGG
AGAAAATGCAAACATCTTATAATAGATGAAATATCTATGGTTGATGGATTGTATTTTGAG
AAGTTAGAAGCAGTAGCAAGACATGTACGGAAGAATAGCAAACCCTTCGGAGGTATTCAA
CTGATTTTGTGTGGAGATTTTCTTCAGTTACCGCCTGTTGTTGATAAAAATAAATCGGCA
AAAAGATTTTGTTTCCAAACATCTTGTTGGGATAAATGTATAAAATTGTGTTTTGAACTG
AAACAGGTTCATCGACAGACTGATCAAGAATTTATATCTATCCTGAACAATATTAGGATA
GGTCGTGTTACAAAGGAAATCAGTGATCGCCTTTTAAAAACAGCAGCCCAGAAGATTGAA
AGTGATGGAATTCTTGCCACAAGATTATGTTCACATACAAATGATTCAAAATCAATAAAC
AATTCAAAATTACGAGACCTGGAAGGCGAAGAAAAAATATTCTCAGCTCAAGATAGTGAT
AACGCCAGCACACTGCTCGACATGCAAACTATTGCACCATCAAAATTAGTTTTAAAAGTC
GGTGCACAGGTGATGTTACTGAAAAATATTAATGTTAATGCCGGTCTAGTGAACGGAGCT
AGAGGTGTAGTCGTTAGATTCGACGAAGGACTTCCGGTTGTGAGATTTAAAAACAAAAAA
GAATACACAACTCGTACCGAACGTTGGTATGTAAAAAATTCTAGTGGTTCATTGTTCTGT
AGACGCCAAATACCTTTAAATTTGGCATGGGCATTCTCAATACATAAATCTCAAGGTCTA
ACATTGGACTGCGTGGAAATGTCCCTCTCTAAAATATTTGAGGCGGGTCAGGCTTATGTC
GCACTTAGCCGAGCTCAAAGTTTAGATACACTGAGAGTGTTAGATTTCGATTCACGGCAT
GTTTGGGCTAACACTGATGTCTTAGAATTTTATCAAAGATTTAGACGACGTTTACAACAA
ATGGAAATAGTACCTCTTGGGAGACCATTATCAGATAAGACAAACAAAAAAGTCAAACTT
AGGGAAATTTTAGCAAAACAATTGAATAAATAG
Protein sequence:
MTGDKEQGINKTPSKQSVRTKLLSGKAKAFEDISPVTVADICQAKSKISKATTTTPSPPS
KKRKFDEAIKGPAPKKLYSPSPLSTTSSLNEEQTRVLEACLSGKNIFFTGSAGTGKSFLL
KRIVAALPPDVTMATASTGVAACHIGGTTLHAFAGIGDGSGTVEKLCERAIKSPLVAQKW
RKCKHLIIDEISMVDGLYFEKLEAVARHVRKNSKPFGGIQLILCGDFLQLPPVVDKNKSA
KRFCFQTSCWDKCIKLCFELKQVHRQTDQEFISILNNIRIGRVTKEISDRLLKTAAQKIE
SDGILATRLCSHTNDSKSINNSKLRDLEGEEKIFSAQDSDNASTLLDMQTIAPSKLVLKV
GAQVMLLKNINVNAGLVNGARGVVVRFDEGLPVVRFKNKKEYTTRTERWYVKNSSGSLFC
RRQIPLNLAWAFSIHKSQGLTLDCVEMSLSKIFEAGQAYVALSRAQSLDTLRVLDFDSRH
VWANTDVLEFYQRFRRRLQQMEIVPLGRPLSDKTNKKVKLREILAKQLNK