New model in OGS2.0 | DPOGS200442  |
---|---|
Genomic Position | scaffold451:- 16645-19170 |
See gene structure | |
CDS Length | 1185 |
Paired RNAseq reads   | 466 |
Single RNAseq reads   | 1737 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008900 (7e-171) |
Best Drosophila hit   | CG8460 (5e-75) |
Best Human hit | chitinase domain-containing protein 1 isoform b (1e-64) |
Best NR hit (blastp)   | chitinase domain-containing protein 1 [Culex quinquefasciatus] (3e-94) |
Best NR hit (blastx)   | Spore germination protein yaaH, putative [Pediculus humanus corporis] (6e-91) |
GeneOntology terms    | GO:0043169 cation binding GO:0004568 chitinase activity GO:0006032 chitin catabolic process |
InterPro families    | IPR001223 Glycoside hydrolase, family 18, catalytic domain IPR017853 Glycoside hydrolase, superfamily IPR011583 Chitinase II IPR013781 Glycoside hydrolase, subgroup, catalytic core |
Orthology group | MCL12235 |
Nucleotide sequence:
ATGAAATATTTGACTATAGTTTTACAAGTCCTGTGTATTTCAAGTTTATCCCTTGCAACA
TTGTCACCTCCCTCCGATAAAAAATCACAAAAGGAAGTAAAACCGCAAGAAGGTTCTAGG
AAAAATAATGTTTTGGATCGAAAATTGGTAGCTGAGACTCCGTACGTGAAAGATATACTT
AAATATCATGCAACTTATCATCAGGACGTACATGTAAAAAATTTTAATAATCTGGTGTTA
GGCTTTGTTACACCGTGGAACAATAAAGGTTATGATGTAGCCAAGAGATGGGCGTCAAAA
TTTAATTACATTTCCCCTGTATGGCTGCAAGTTAAAAGGCAAAGCTCCAACATATACATC
ATTTCTGGTCTTCACGACGTGGACAATGCATGGATGAAGGCGGTCAAACAGAAAGGAACT
GACACTGGCTTAAGAATTGTACCGAGATTATTGTTTGAAAACTGGCAGCCATCAGATTTG
AAGGCGTTTTTCATTGAACCATCATCATACAGTGAACAGAAAGCGTTGATTGAAGAAATC
AAGAAAGTCTGTAAGCAATGGGGTTTTGACGGGATCGTGTTAGAAATGCTTTCTCAAATC
GGAAAGTACATCGACAAATCAGTGAAGTTTATACAACACTTCGGTCTTGAGATGAGCGAG
AACGGCTACCACCTTATTCTCGTGTATCCACCATTTAGAGGTTATCCAAGCGATGACTTC
TTTGTTCAAGCCTTCAATGAAATCCATCCTTATGTAGATGCTGTCTCCGTCATGACATAT
GATTTTTCAAATCCTCAAAAACCGGGTCCGAACGCACCATTCTATTGGCTGAGATTGTGC
ATTGAAAAACTAATAGGCGATGATGAAAATCCGACAAAGAGATCAAAAATATTACTCGGT
TTAAATTTCTATGGTAACTCGTATACCGCGAACGGTGGCGGTCCCATTGTTGGCACGGAG
TATATTGAATTGTTGAAAAATGCGAAACCGAACCAGCTTATATCTTACAACAATAATACT
GCTGAGAATTATCTTGAAGTCAGGACATTACAAGGTACAAAGAAGATTTTCTTCCCCACA
TTGTACTCAATCCATAAAAGACTGGAGCTCGCTAGGGAATACCGAACTGGTGTTGCCATT
TGGGAACTCGGTCAGGGATTGGACTATTTCTATGACCTATTTTAA
Protein sequence:
MKYLTIVLQVLCISSLSLATLSPPSDKKSQKEVKPQEGSRKNNVLDRKLVAETPYVKDIL
KYHATYHQDVHVKNFNNLVLGFVTPWNNKGYDVAKRWASKFNYISPVWLQVKRQSSNIYI
ISGLHDVDNAWMKAVKQKGTDTGLRIVPRLLFENWQPSDLKAFFIEPSSYSEQKALIEEI
KKVCKQWGFDGIVLEMLSQIGKYIDKSVKFIQHFGLEMSENGYHLILVYPPFRGYPSDDF
FVQAFNEIHPYVDAVSVMTYDFSNPQKPGPNAPFYWLRLCIEKLIGDDENPTKRSKILLG
LNFYGNSYTANGGGPIVGTEYIELLKNAKPNQLISYNNNTAENYLEVRTLQGTKKIFFPT
LYSIHKRLELAREYRTGVAIWELGQGLDYFYDLF