| New model in OGS2.0 | DPOGS200414 |
|---|---|
| Genomic Position | scaffold451:+ 58488-59252 |
| See gene structure | |
| CDS Length | 765 |
| Paired RNAseq reads | 237 |
| Single RNAseq reads | 903 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008990 (5e-42) |
| Best Drosophila hit | twist, isoform B (5e-19) |
| Best Human hit | twist-related protein 1 (6e-26) |
| Best NR hit (blastp) | hypothetical protein LOC100160123 [Acyrthosiphon pisum] (6e-30) |
| Best NR hit (blastx) | Twist-related protein 2 [Salmo salar] (4e-28) |
| GeneOntology terms | GO:0030528 transcription regulator activity GO:0045449 regulation of transcription GO:0005634 nucleus |
| InterPro families | IPR001092 Helix-loop-helix DNA-binding domain IPR011598 Helix-loop-helix DNA-binding IPR015789 Twist |
| Orthology group | MCL15432 |
Nucleotide sequence:
ATGTGTTATAAGAGTTATAACAACAGGTTCTCTGTTAAACGAGAAAGGGAGTATTATGAT
GAAAAATATCAATGCGTTCCTGAGGAAGAAACGAGGTATGTTAAGGTGGTGTATACGTCA
TCACCTCCACATCACACGGATATAAGTAATGGAATCGAAAGATTGCAATATAAGTACTCG
GCCAACACAGCACTCGGCGAAGACACGAAATGCCAACAAAGCCATATAAGCCAACCGTAC
GAGCTGTATGTCCCAACACAAGCAAAACAGTTCACACCAATTATCTATGAAGATTCAAAT
TCACAGGACTCGTGCAATTACTATGAAACAAACGTGACTACTGATGAAGACTTGTACGCT
TATACAAAAAATGGAGGCCCCATCTTCGACGAATTTGATGATAAACGATCAAGAAAACGT
TTGAAATCATCTAGAAAAAAACTACATTCTGGCGAAGACATGCAAATACAACGAGTTATG
GCAAATATTCGGGAAAGACAGCGAACTCAGAGTTTGAACGAGGCCTTCGAAAGTCTGAGA
CAAATAATACCATCCTTGCCGAGCGACAAATTATCTAAATTACAGACGTTGCAATTAGCG
ACTCAGTACATCGAATTTCTTTATGAGATTTTATCAAACAGTGAAGCAACTTCGACCGAT
GTTGATACAAACAAAAACCAGGGTAAATACTTGGCGCTGGACAAATCGAGTTATGCTTTC
TCCATGTGGCGAGTGGAAGGTCAATGGAACAAAAAACAAACGTGA
Protein sequence:
MCYKSYNNRFSVKREREYYDEKYQCVPEEETRYVKVVYTSSPPHHTDISNGIERLQYKYS
ANTALGEDTKCQQSHISQPYELYVPTQAKQFTPIIYEDSNSQDSCNYYETNVTTDEDLYA
YTKNGGPIFDEFDDKRSRKRLKSSRKKLHSGEDMQIQRVMANIRERQRTQSLNEAFESLR
QIIPSLPSDKLSKLQTLQLATQYIEFLYEILSNSEATSTDVDTNKNQGKYLALDKSSYAF
SMWRVEGQWNKKQT