New model in OGS2.0 | DPOGS204804  |
---|---|
Genomic Position | scaffold878:- 7123-7882 |
See gene structure | |
CDS Length | 498 |
Paired RNAseq reads   | 2 |
Single RNAseq reads   | 5 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010833 (5e-57) |
Best Drosophila hit   | slouch (4e-42) |
Best Human hit | PREDICTED: LOW QUALITY PROTEIN: hypothetical protein LOC54729 (4e-32) |
Best NR hit (blastp)   | nk homeobox protein [Aedes aegypti] (3e-52) |
Best NR hit (blastx)   | GF16414 [Drosophila ananassae] (1e-43) |
GeneOntology terms    | GO:0007521 muscle cell fate determination GO:0003700 sequence-specific DNA binding transcription factor activity GO:0006355 regulation of transcription, DNA-dependent GO:0005634 nucleus GO:0007525 somatic muscle development GO:0007399 nervous system development GO:0003702 RNA polymerase II transcription factor activity GO:0007517 muscle organ development GO:0007501 mesodermal cell fate specification GO:0043565 sequence-specific DNA binding |
InterPro families    | IPR001356 Homeobox IPR009057 Homeodomain-like IPR020479 Homeobox, eukaryotic IPR017970 Homeobox, conserved site IPR012287 Homeodomain-related |
Orthology group | MCL12815 |
Nucleotide sequence:
ATGGATGATGAGATCTTAACACAATCAGATTTAGACGAAAATGGTGACCCAAAGAGCCCC
ACCAGCTCTAAGAAAGGGAAGAACGGTTCGTCCAGAGATCAGAAGGGAGGGACCAAGCCG
AGACGAGCCAGAACAGCGTTCACGTACGAACAGCTGGTGTCTTTGGAGAATAAATTTAAG
ACTACTAGATATCTCTCCGTGTGCGAGCGACTTAATCTCGCTTTGAGCCTCAGTTTAACA
GAAACCCAGGTCAAGATCTGGTTTCAAAATCGTCGTACGAAATGGAAAAAGCAGAACCCG
GGTATGGACGTGAATAGTCCGACGGTGCCCCCTCCGCCGGCGGGGGCCTTTCCGTCGGGA
GCTTATCCGGGGGGCCTTCTATACTCCCACGGGGTTCCATACCCCTTCACCGGGCCGGGG
CCCTACGCCCCTTACTTCCACCATCTGGCTGCGAACCACCACCACAGCCACGGCTCCTTG
GGACATTCCCATACGTGA
Protein sequence:
MDDEILTQSDLDENGDPKSPTSSKKGKNGSSRDQKGGTKPRRARTAFTYEQLVSLENKFK
TTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGMDVNSPTVPPPPAGAFPSG
AYPGGLLYSHGVPYPFTGPGPYAPYFHHLAANHHHSHGSLGHSHT