| New model in OGS2.0 | DPOGS200591 |
|---|---|
| Genomic Position | scaffold168:- 170028-170994 |
| See gene structure | |
| CDS Length | 669 |
| Paired RNAseq reads | 751 |
| Single RNAseq reads | 2039 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011280 (9e-121) |
| Best Drosophila hit | Rab39 (8e-97) |
| Best Human hit | ras-related protein Rab-39B (1e-55) |
| Best NR hit (blastp) | unnamed protein product [Heliconius melpomene] (2e-129) |
| Best NR hit (blastx) | unnamed protein product [Heliconius melpomene] (6e-126) |
| GeneOntology terms | GO:0005525 GTP binding GO:0003924 GTPase activity GO:0007264 small GTPase mediated signal transduction GO:0015031 protein transport |
| InterPro families | IPR013753 Ras IPR020851 Small GTPase IPR001806 Ras GTPase IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR005225 Small GTP-binding protein |
| Orthology group | MCL11941 |
Nucleotide sequence:
ATGGTAGACCCAATATTTGATTACCAGTTTAGGCTTATTTTAATCGGGGATAGCACAGTA
GGCAAGAGTTCTTTGCTAAAATATTTTACAGATGGAAAATTCGCTGAGCTATCCGATCCA
ACTGTGGGGGTTGATTTTTTCGCTCGTATTATCGAAGTGCAGGATGGTACAAGAATTAAA
TTACAACTCTGGGACACGGCAGGACAAGAAAGGTTTAGGTCAATCACGAAATCCTATTAC
AGGAACTCAGTTGGTGCTCTTTTAGTTTACGACGTGTGTAATCGATCCAGTTTTGAACAC
ATACCTTTATGGATGATGGAAGCGAAGAGGCATATAGAACCACACCGACCAGTGTTTGCA
TTGGTTGGATGTAAAGTTGACCTTGTTGGATCTGATAATAAGAATGGTGCAAGGAGAGAA
GTATCCTGTGAGGAGGCCAGGATGTTTGCTGAAGAAAATGGACTTCATCACGTCGAGACA
TCAGCAAAAACGGGCCTGAATGTGGAACAAGCATTCATACTTGTGGCTCAGGAAGTGTAT
AATCGCATACAAACAGGTGAGTACAAAGTGGAGGACGGCTGGGATGGAATAAAGACAGGT
TTTAACCGACCAAATGGTATGGACTTCAATCTACTCGAAGCAGAAACAGTTCAGTCCACC
TGCTGCTAG
Protein sequence:
MVDPIFDYQFRLILIGDSTVGKSSLLKYFTDGKFAELSDPTVGVDFFARIIEVQDGTRIK
LQLWDTAGQERFRSITKSYYRNSVGALLVYDVCNRSSFEHIPLWMMEAKRHIEPHRPVFA
LVGCKVDLVGSDNKNGARREVSCEEARMFAEENGLHHVETSAKTGLNVEQAFILVAQEVY
NRIQTGEYKVEDGWDGIKTGFNRPNGMDFNLLEAETVQSTCC