| New model in OGS2.0 | DPOGS200593 |
|---|---|
| Genomic Position | scaffold168:- 160498-161828 |
| See gene structure | |
| CDS Length | 456 |
| Paired RNAseq reads | 3828 |
| Single RNAseq reads | 16262 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011282 (1e-80) |
| Best Drosophila hit | ribosomal protein S13, isoform B (1e-72) |
| Best Human hit | 40S ribosomal protein S13 (4e-74) |
| Best NR hit (blastp) | RecName: Full=40S ribosomal protein S13 (2e-82) |
| Best NR hit (blastx) | RecName: Full=40S ribosomal protein S13 (2e-80) |
| GeneOntology terms | GO:0003674 molecular_function GO:0003729 mRNA binding GO:0003735 structural constituent of ribosome GO:0005515 protein binding GO:0005622 intracellular GO:0005634 nucleus GO:0005730 nucleolus GO:0005829 cytosol GO:0005840 ribosome GO:0006412 translation GO:0006414 translational elongation GO:0008150 biological_process GO:0022627 cytosolic small ribosomal subunit GO:0033119 negative regulation of RNA splicing |
| InterPro families | IPR012606 Ribosomal protein S13/S15, N-terminal IPR000589 Ribosomal protein S15 IPR009068 S15/NS1, RNA-binding |
| Orthology group | MCL11146 |
Nucleotide sequence:
ATGGGTCGTATGCACGCACCTGGGAAAGGTATCTCACAGTCGGCGTTACCATACCGCCGC
AGTGTCCCCACCTGGTTAAAACTCACAGCTGATGATGTTAAGGAACAGATTTTCAAACTC
GGCAAGAAGGGTCTTACTCCATCCCAAATCGGTGTCATGCTCAGGGATTCCCACGGAGTT
GCCCAAGTCAGATTTGTTACCGGCAAAAAGATTCTCCGTATCATGAAAGCCATGGGTCTA
GCTCCGGATCTACCTGAAGACTTGTACTACCTGATCAAGAAAGCCGTCGCTATGAGGAAG
CACTTGGAACGTAACAGGAAAGACAAAGACAGCAAATTCAGGCTCATTCTCGTAGAGTCT
AGAATCCACAGGCTCGCACGCTACTACAAAACCAAGAGCGTGCTGCCCCCTAACTGGAAG
TATGAGTCGAGCACCGCCTCTGCTCTTGTGGCTTAA
Protein sequence:
MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV
AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES
RIHRLARYYKTKSVLPPNWKYESSTASALVA