New model in OGS2.0 | DPOGS200595  |
---|---|
Genomic Position | scaffold168:- 146073-149651 |
See gene structure | |
CDS Length | 1641 |
Paired RNAseq reads   | 678 |
Single RNAseq reads   | 1872 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011284 (0.0) |
Best Drosophila hit   | Van gogh (6e-140) |
Best Human hit | vang-like protein 1 isoform 2 (2e-83) |
Best NR hit (blastp)   | unnamed protein product [Heliconius melpomene] (0.0) |
Best NR hit (blastx)   | unnamed protein product [Heliconius melpomene] (0.0) |
GeneOntology terms    | GO:0007163 establishment or maintenance of cell polarity GO:0001736 establishment of planar polarity GO:0042067 establishment of ommatidial planar polarity GO:0005886 plasma membrane GO:0016021 integral to membrane GO:0001738 morphogenesis of a polarized epithelium |
InterPro families   | IPR009539 Strabismus |
Orthology group | MCL11603 |
Nucleotide sequence:
ATGGAGACTGAGAGCGTGCGGTCCGAGGTGAGCAGCCGGTCGCGGCGCAGTTCAAGACAC
CGACAACACACGCATAGGAGCACTCGGAGTTCAAAATCTCAGAGAAAGGAGTCTGATAAT
ATGATGGCGCCGTTTCAAACCAGCGTTAATATCAATCCTGAAACAGGGAGAGACGGCCAG
GAAGTCATTGAAGTGCAAATCCTACCGCAGGATGAAAACTGGGGCGAGAACACAACAGCC
GTTACTGGAAATACCTCGGAAGGCTCTCAATCCATGGAAGATGTCAGCAACTGGCCCATA
GAAGCCGATAGTGGCTTGGGTTTTGTGTGTTCGAGATATTTCTCAACCACAATAGCTTTA
GGGTTATCATTGGTCTCCTTCGTGAGTCCGCTAGCCATGGTTGTGTTACCTAAACTGGGT
TTCTTTCCAGGTTTAACCGATAACCTGGCATTGCAGCCGAGTCAGAGGATACAATTATTA
TCCTGTACCGCAGAATGCAAAGGTATCCTGCTGTCTTTAGCGTTTAAATTAGTTCTACTG
GCGATAGGTGTGTGGGCCGTGTTCCTGAGGCCACGGAACGCGGTTCTGCCGAGGATATTC
GTGTTCCGCGCCATGATGCTGGTTATTCTGGCAGTCTGTGCGTTTTCCTATTGGCTATTC
TATTTCGTCCAAATAACCGAGGCCTCCAAAGCGCTGGCTGTTGGCGAAGAAGCCATGGAC
TATACTTCTCTGGTTTCATATTCGTCAAGTTTCTCTGACACATTGCTGTTCATACATTAC
GCTGCGGTCGTACTGATGGAGATAAGGCATCTGGAGCCTGTCTATTACGTCAAGGTTGTG
AGAAGTCCAGATGGTGAGAGTAGATCGTACGCCATCGGACAATTGAGCATTCAAAGAGCA
GCTGTTTGGGTCCTGCAGAAGTATTACACGGAGTTTCCTATATACAACCCGTACTTGGAG
AAGATTCCCATATCGAAGTCCCAGAGGAAAGGGCAGGGCAGCATAAAGTTTTATGAAGTC
GACTCCAATACAAACGCTCCGTCGGGACAAACGAGATCGGCGAGTGGTTCCGTATCAGGT
CGGCGGAACTCACACAACGAGCGGTACTACGAGGAGGCAGAACGCGCTCGGAGAGTGAGG
AAGCGTCGGGCTAGACTACACTCGGCGGCCGAAGACGCCTTCGCACACGTCCGACGAGTG
AGGCTCACGGCTGCTGGCGGTGGAGCCCTGGGGCCTCGTGAGGCGGCCCAAGCGGTATTC
CCATCATTAGCGAGGGCGTTACAAAAGTACCTCCGCGCGACCAGACAACAACCAAGACAT
TCAGCTGAATCGGTGTTGGCTCATTTGGCCCGCTGTCTCTCCCAAGATGCATCACCACGA
GCCTTCCTCGAACCGTTTCTAGTCGAGGGACCCGTACTATCAGCAGAACAAGAGTCAAGA
ACTTTACAGCGCTGGGCGCTAGTCTCCGATGACCTCCTGGCACGACCTCTGGCCGACGGA
GTGGAGTTCCAACTAAGACAGGGCGACGTTTCGTTGATCTGTACCATCAAGAGTCTACCG
AGGTTCAGTCTATCAGAGGAAGTGGTGGATCCAAAAAGCAATAGATTCGTATTGCGGCTT
AATTCAGAGACATCTGTGTGA
Protein sequence:
METESVRSEVSSRSRRSSRHRQHTHRSTRSSKSQRKESDNMMAPFQTSVNINPETGRDGQ
EVIEVQILPQDENWGENTTAVTGNTSEGSQSMEDVSNWPIEADSGLGFVCSRYFSTTIAL
GLSLVSFVSPLAMVVLPKLGFFPGLTDNLALQPSQRIQLLSCTAECKGILLSLAFKLVLL
AIGVWAVFLRPRNAVLPRIFVFRAMMLVILAVCAFSYWLFYFVQITEASKALAVGEEAMD
YTSLVSYSSSFSDTLLFIHYAAVVLMEIRHLEPVYYVKVVRSPDGESRSYAIGQLSIQRA
AVWVLQKYYTEFPIYNPYLEKIPISKSQRKGQGSIKFYEVDSNTNAPSGQTRSASGSVSG
RRNSHNERYYEEAERARRVRKRRARLHSAAEDAFAHVRRVRLTAAGGGALGPREAAQAVF
PSLARALQKYLRATRQQPRHSAESVLAHLARCLSQDASPRAFLEPFLVEGPVLSAEQESR
TLQRWALVSDDLLARPLADGVEFQLRQGDVSLICTIKSLPRFSLSEEVVDPKSNRFVLRL
NSETSV