| New model in OGS2.0 | DPOGS200597 |
|---|---|
| Genomic Position | scaffold168:- 109635-110444 |
| See gene structure | |
| CDS Length | 810 |
| Paired RNAseq reads | 15 |
| Single RNAseq reads | 41 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011285 (1e-115) |
| Best Drosophila hit | optix, isoform A (4e-79) |
| Best Human hit | homeobox protein SIX6 (3e-79) |
| Best NR hit (blastp) | unnamed protein product [Heliconius melpomene] (2e-121) |
| Best NR hit (blastx) | unnamed protein product [Heliconius melpomene] (8e-111) |
| GeneOntology terms | GO:0045449 regulation of transcription GO:0006355 regulation of transcription, DNA-dependent GO:0003677 DNA binding GO:0043565 sequence-specific DNA binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus |
| InterPro families | IPR001356 Homeobox IPR009057 Homeodomain-like IPR012287 Homeodomain-related |
| Orthology group | MCL11837 |
Nucleotide sequence:
ATGCGCGGCTCCTGGGACGAGTCCACGACGGCGGCGCTGCACGCGCGCATCCTGGAGGCG
CAGCGCGGGCCCGCGGCCGAGCCCGCAGCCTGCGCTGACCCACCCGCGCCGTTGTCTCTG
GCCGCGCTCGAGCTGGCCGCTCCGACTCCTCTGCTGCCGCTACCCACGCTGTCCTTCAGC
GCGGCGCAGGTGGCCACCGTCTGCGAGACCCTGGAGGAGAGTGGTGACGTGGAGCGCCTT
GCGCGCTTCCTGTGGTCCCTGCCGGTGGCTCACCCCAACGTTGCCGAGCTGGAGCGCTGC
GAGGCGGTGCTTCGGGCGCGGGCCGTTGTCGCCTTCCACGCCGGCCGCCACCGGGAGCTC
TACTCGATTCTCGAGAGACATCGGTTCCAGCGCTCGAGCCACGCGAAACTACAGGCTCTA
TGGCTCGAAGCCCACTACCAAGAGGCCGAGCGACTCCGAGGCCGTCCGCTCGGCCCCGTC
GACAAATACCGCGTGCGGAAGAAGTTCCCCCTGCCGAGGACCATATGGGACGGCGAACAG
AAGACGCACTGCTTCAAGGAACGGACGAGGTCGCTGCTGAGGGAGTGGTATCTCCAGGAC
CCGTATCCGAACCCCACAAAGAAACGGGAGCTGGCGGCGGCGACGGGCTTGACGCCGACC
CAGGTGGGCAACTGGTTCAAGAACCGACGCCAGCGGGATCGCGCCGCCGCCGCCAAGAAC
CGCTCCGCCGCCCTGGGCCGGGGCTTCGCCTCTTCGTCCACCTACGACGAGGACTCCGCG
GACTCCGAGATCAACGTGGACGAGGAATAG
Protein sequence:
MRGSWDESTTAALHARILEAQRGPAAEPAACADPPAPLSLAALELAAPTPLLPLPTLSFS
AAQVATVCETLEESGDVERLARFLWSLPVAHPNVAELERCEAVLRARAVVAFHAGRHREL
YSILERHRFQRSSHAKLQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPLPRTIWDGEQ
KTHCFKERTRSLLREWYLQDPYPNPTKKRELAAATGLTPTQVGNWFKNRRQRDRAAAAKN
RSAALGRGFASSSTYDEDSADSEINVDEE