| New model in OGS2.0 | DPOGS200642 |
|---|---|
| Genomic Position | scaffold168:+ 126737-137290 |
| See gene structure | |
| CDS Length | 3294 |
| Paired RNAseq reads | 911 |
| Single RNAseq reads | 2725 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011319 (9e-31) |
| Best Drosophila hit | deflated (1e-78) |
| Best Human hit | integrator complex subunit 7 isoform 1 (1e-92) |
| Best NR hit (blastp) | unnamed protein product [Heliconius melpomene] (0.0) |
| Best NR hit (blastx) | unnamed protein product [Heliconius melpomene] (0.0) |
| GeneOntology terms | GO:0032039 integrator complex GO:0016180 snRNA processing GO:0005515 protein binding GO:0005634 nucleus |
| InterPro families | IPR016024 Armadillo-type fold IPR011989 Armadillo-like helical |
| Orthology group | MCL11513 |
Nucleotide sequence:
ATGATCGGAGTAAGATTAAACTCATTCAGCGATAATTCAGGGGAACCTGAACAGGACGCT
AATTCTGCTTTAACAGAGTTGGATAAAGGTCTAAGGTCTGGTAAAGTCGGAGAACAATGT
GAAGCTATAGTCCGTTTTCCTCGTTTATTTGAAAAGTACCCGTTTCCTATATTAATTAAT
TCATCATTTTTAAAATTGGCGGACGTGTTTCGTATGGGTAACAACTTTTTACGGCTCTGG
GTTTTACGCGTGTGTCAACAGAGCGAGAAGCATTTGGATAAGATATTAAATGTGGATGAG
TTTTTGAGGCGGGTTTACAGCGTGTTGCATTCAAATGACCCTGTGGCGCGAGCGTTGGCG
CTGAGAACTTTGGGTGCCGTGGCAGGAATAATTCCCGAGCGTCAGAACGTCCATCATGCA
ATCCGCAGAGGTCTAGAGAGCCACGATAATGTAGAAGTCGATGCCGCTATTTATGCTACT
ACTAGATTTGCTGCACATTCAAATTCATTCGCAGTGGCCATGTGCAATAAGCTGTCGGAC
ATGGTCGAGTGCGAGAGTACGGGGGTTGAGCGGAGAGCAAAACTCGTCAGGGCCTTACGG
ACAGTACATGGCGGAGCGGTTCGTGCTCAAGGTGTCCTGAAGCTGCTAAGGTCCCTGCTG
GAGAGATTCCCTTCATCCAGCTCAGTCCGAGCTGCAATCACAGCTCTCACTGCCATCGCT
GCGGATACAGTAGTGCATGTACCCGATCAGGTGGAGCTTCTGCTTAAACTGGCGGTTAAC
GACGCTCGGTCAGCTGTTCGCCGCGCTGCGCTAGTGGGTCTTCGTAAACTGGCTGAGCAT
GCTGCGCTATGGCCCACTGACTGTATCCAAGACCTGGTGCACGCGGCTTCAGAGATGCAG
GACGATGAGCATAGCATGCTCTGCCTACAGGTCATGCAGATCCTGGTCCGTTGCCCGGCG
GTGTGCGCGGCGGCCGGGCCCGAGGCGTCTCTCCGGCGCCACTGCAGCGCTGCAGCGCTC
AGCGTCAACATGAAGCTAGCTGCAATCGCTGCAGACGTACTCACAAGAATCGTAGCCCAC
TGCTACGAGGAGAATCTCCCGGTCGAAGGTTCGGAGCTGATGCTGGCCCTGGAGTCGCTG
GTGATCGCCACCGGCATGGACAACGGACAGAATAATATACGACCCCTGCGGATAGCGCTC
AGATGTCTGGTACAATTGAGTTCCTCCGCCCCTCACCTGTACGCGAGTCGAACCGCTGGT
GTTTTGGGGTCCGCCGCCCAGAGCTCCGTGGGTCCGCGACAGGCTGCACTACTCGAAGGC
CTGGCTGCGCTCGGGGCCCTAGGGGCCTCCGCCGCACCCTATCTCATACCAGCCCTAGAG
AGAGCCAAGGAGGACTGCAAGGACCCGACCTACGACGGCACCACTCTAGTGCTGATCTGC
ACGGTGCTGCTGCAGGAGAGGGCGGTGGCAGCGCTGCGGTACAGGATCCGGGGCTCGTGG
GAGGAGAGGATCAAGGATGCCGTGAGGGGAGCCGACGGCTGGACCAGATACAGGGTCGCC
AGGACCGCGCTCAGGTACGGCCACCACCGCCTGGCGGGGGAGCTCCTGGAACAGCTGGCT
ACTCAAGCGCCGTCCGAGGCGGCGCAGCGCTGGCTCACAGCACTACACCGAGCGGCCGCA
GCTGATAGGCTGCTGGAAGATGAAGTTATTCCATGTCGTTTTTATTACGACACCGATCCC
CTCGGCTCCTCGAGCTCGCCGTCCTGCAAGCCACATCATGTTTTAAAGTCCGCGCCGCTT
TCCTTTGACGTTAATTTGTGCATAACACTCGGCCACCGACAGGTGTCTCGGCGCTGGAGG
AGGCGAGCAGAACAGATCAAACCCTGGGCACCTCCCTATAGATACTCTCGCACGAACTCC
CAAATACTTAACTTGAGCCAAATGTTGCAGCAAATAGGTGCGCTACTCGCCTGTATATCG
TTACTATACTTAGTCAAAGATTTTATTATTTCTATGGGTCATGCTAGCGACACCTTCCGT
GCACCGTTTGTCACCTTCCACCACAGCAATATCACACGGAAGCAAGGATTGAGGGCAAAG
AAGACGAAGGAGGAGTCGGATAAGGGTCAGAGAGAGTCCGGAAACGAGAAGGAGGGCGAG
GGTCAGGAGTTACCCCTCTACTGTCAGAGCGTCTACACCTACCCCCACACGGACTATATC
AATTTCCAGCCGATGCCTGTTGAAGTAAAAGCACTTCCCCTGATGGTGGACTGCCGGCCG
GCGGGCGCTCCGCCCCACGACATGCCCCACAATAACGGGACCGGCGATAACAGCCATCAG
GTAACAACAGAGACCTCATCGTTATTGTATATGATGCAGCCACCCCGGCCGGAGCCGAGG
CCCCGGACACTAATGATGGCTCATTCGGCGACTGAGTACAGCTCGCTTTGTGTCCCAACT
CCCGAGCATTTAGTCGTATACTTTTCTGTCAGAGAAGTGTTCTCTGTGTCCGTTGTGGGT
ATTCAGTACAATATGGAACAACAGGCTCCCAGTGGCGAGCTGGTGTCGCACGCCCGCGCC
TCCACTCCCGCCGCGCCCACCTACCAGCACGCCTACAACGGTGAGACGAACATATACAAT
ATAAATGAGAAGCGGACCGGCTTCTTGTGCATAATGTTCTGCGACCCAGCACGGGTGGTG
TCCTCCGAGATAGCTATATTCAATCAGTCAGTACCCGGAGGCGGTCCGTGTCCACACGCG
GAGGCCGTGGTGGCCGGGGTCCGAGCTCTGTGTCGGGGGATCGTGTGGCCGCGGGCGGTC
TGTGCGGGCGGGGCGGGCGGGGCGCCCTGCCGCGTGTCGCTGTCCCCTGCGCCGCGAGCG
CCCCCCGCCGACCACGCCGCCGCCCTCCCCCTGGCGCACCGCCTGGCCGTTAAGCTGGAG
GGCGTTCTGCTGCCGCCGCCGGGCAAGATGAAGAACAAGCGGCAAGTTAAAGGAGTCCAG
ATCACTGTGACCGCGACTCCACATCCGCGGACCAACGAGAAGACGGTGGAGCTGACGAAC
GTACAGCCGACGCTGACGGCCGTGCAGACGGTGACGCCCGTGAGGGACTTCTTCTCCGCC
CAGCAGCTGGTGAGCGTCCCGGCTCCCGGACTGTACACGGTCGCCGTGGAGGCGGCCTTC
GTGGACGAGAAGGGCCAGCTGTGGCACACCGGGCCCAGGAGCTGCATCGTCATCAAGGCG
CACGAGGACCCCGGCACCAAGGGGAACTCGCAGACCTCGAGGAGCAGGTTTTGA
Protein sequence:
MIGVRLNSFSDNSGEPEQDANSALTELDKGLRSGKVGEQCEAIVRFPRLFEKYPFPILIN
SSFLKLADVFRMGNNFLRLWVLRVCQQSEKHLDKILNVDEFLRRVYSVLHSNDPVARALA
LRTLGAVAGIIPERQNVHHAIRRGLESHDNVEVDAAIYATTRFAAHSNSFAVAMCNKLSD
MVECESTGVERRAKLVRALRTVHGGAVRAQGVLKLLRSLLERFPSSSSVRAAITALTAIA
ADTVVHVPDQVELLLKLAVNDARSAVRRAALVGLRKLAEHAALWPTDCIQDLVHAASEMQ
DDEHSMLCLQVMQILVRCPAVCAAAGPEASLRRHCSAAALSVNMKLAAIAADVLTRIVAH
CYEENLPVEGSELMLALESLVIATGMDNGQNNIRPLRIALRCLVQLSSSAPHLYASRTAG
VLGSAAQSSVGPRQAALLEGLAALGALGASAAPYLIPALERAKEDCKDPTYDGTTLVLIC
TVLLQERAVAALRYRIRGSWEERIKDAVRGADGWTRYRVARTALRYGHHRLAGELLEQLA
TQAPSEAAQRWLTALHRAAAADRLLEDEVIPCRFYYDTDPLGSSSSPSCKPHHVLKSAPL
SFDVNLCITLGHRQVSRRWRRRAEQIKPWAPPYRYSRTNSQILNLSQMLQQIGALLACIS
LLYLVKDFIISMGHASDTFRAPFVTFHHSNITRKQGLRAKKTKEESDKGQRESGNEKEGE
GQELPLYCQSVYTYPHTDYINFQPMPVEVKALPLMVDCRPAGAPPHDMPHNNGTGDNSHQ
VTTETSSLLYMMQPPRPEPRPRTLMMAHSATEYSSLCVPTPEHLVVYFSVREVFSVSVVG
IQYNMEQQAPSGELVSHARASTPAAPTYQHAYNGETNIYNINEKRTGFLCIMFCDPARVV
SSEIAIFNQSVPGGGPCPHAEAVVAGVRALCRGIVWPRAVCAGGAGGAPCRVSLSPAPRA
PPADHAAALPLAHRLAVKLEGVLLPPPGKMKNKRQVKGVQITVTATPHPRTNEKTVELTN
VQPTLTAVQTVTPVRDFFSAQQLVSVPAPGLYTVAVEAAFVDEKGQLWHTGPRSCIVIKA
HEDPGTKGNSQTSRSRF