New model in OGS2.0 | DPOGS200643  |
---|---|
Genomic Position | scaffold168:+ 141710-143597 |
See gene structure | |
CDS Length | 1368 |
Paired RNAseq reads   | 211 |
Single RNAseq reads   | 530 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011320 (8e-106) |
Best Drosophila hit   | CG4781 (6e-17) |
Best Human hit | slit homolog 3 protein precursor (4e-14) |
Best NR hit (blastp)   | unnamed protein product [Heliconius melpomene] (6e-110) |
Best NR hit (blastx)   | unnamed protein product [Heliconius melpomene] (1e-101) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR003591 Leucine-rich repeat, typical subtype IPR000483 Cysteine-rich flanking region, C-terminal domain IPR001611 Leucine-rich repeat |
Orthology group | MCL18820 |
Nucleotide sequence:
ATGAAATATATTAACATTATTTACGCTCTAATCGCGTTCCGTCTTAAGGTTGAAAGTGCG
AGCGTGTGTGAGAGTCAGTATTGCGTGTGTCGCCACAACAATAAGAGTGACAGAGATCTG
TTCGGCGAAATTGTTACTTGTTCCTACGATCATACAGTGCTTAATAAGGACTACGAGTTA
CCGCTCACGACGCACACCTTAGATCTATCGAGAAACAACATAACTAGTGTGCAAACTTCG
AAATTATTGAAATCAGATACACTAACCGAACTATCACTTAGAGATAATGTAATCAAAGGA
ATATCGCCTTCCGCGCTGCGGCTAGAGAAGTTGAAAAGGCTGGATCTGAGTAACAACGAA
TTGGAATTTCTACACAAAGATACGTTCAGGTACATCAGAGGACTGGAGTATCTGAATTTG
GCGAATAATAAATTTACTACCTTCGAAAAAATCACATTCCACCACTTGGAGGATTTGAGG
GAAATCATATTAGACAACAATTATCTTGGACCGAGTTTAGATGACAATAATCTATTCGAT
CGTAACGGCTACGGACTAACTCACAAGATCCAGTCCCTGTCAATGAGCGGCATTAAATTG
GACCACGTCCATGAAAACTTTTTCGTTGACGCGTTTGACTTGAGGCGGCTCACGATATCA
AATAATAACATACACGACATTTTCGAACTGCCTTTTACTTTAGAATACTTGGATCTATCA
GACAACCCGATCGATATTATCGCTGGCGAAGACTTCGCTGATTTATCAGCTCTGAAAGAA
TTGAAGTTGAACAATTTGAATATAAAGGAAATACCAGATTTTGCATTCGCTTCGTTGCAT
TCGTTGACGAGCTTGGAATTGGAAAGAAATATGAAACTGAACAATTTCAGCTTTATGGCG
TTCGGCCAGGAGGTCTTAGAGGATGCTGATGACTTTACGCTCGAAAAATTATCCTTAAGA
GGTTCCAGGTTGACAACCCTTGACAAGAGATTGGAAGTGCCTTTCGGACAATTAATACGT
TTAGATTTACAAGGAAACTATTGGAATTGTGACTGCCATCTAATTTGGTTAAAACAGTTC
CAAATGCAACCAGAGGACTCGGTTCATCTAAGATGTTACACTCCAAAAATCTTAGTGAAC
GCTAAGATAATGGATCTCGACCGGAAGTACTTCACATGTTCGGCAGAAAACCGTCGGACT
GGTGTCGTTATAGCGGTTATCTGTCTATGTGTCATGTTGACAGCTGTCGCTATATGGGTG
TTTATGTTCTTACCTAGTAATATACCTAAATTCACTTTCTTAACCAGCATGTACGCGCCC
GCCGGAGGATACGCCGGGTTACCTGTTATTTATAATAATAACCTGTAG
Protein sequence:
MKYINIIYALIAFRLKVESASVCESQYCVCRHNNKSDRDLFGEIVTCSYDHTVLNKDYEL
PLTTHTLDLSRNNITSVQTSKLLKSDTLTELSLRDNVIKGISPSALRLEKLKRLDLSNNE
LEFLHKDTFRYIRGLEYLNLANNKFTTFEKITFHHLEDLREIILDNNYLGPSLDDNNLFD
RNGYGLTHKIQSLSMSGIKLDHVHENFFVDAFDLRRLTISNNNIHDIFELPFTLEYLDLS
DNPIDIIAGEDFADLSALKELKLNNLNIKEIPDFAFASLHSLTSLELERNMKLNNFSFMA
FGQEVLEDADDFTLEKLSLRGSRLTTLDKRLEVPFGQLIRLDLQGNYWNCDCHLIWLKQF
QMQPEDSVHLRCYTPKILVNAKIMDLDRKYFTCSAENRRTGVVIAVICLCVMLTAVAIWV
FMFLPSNIPKFTFLTSMYAPAGGYAGLPVIYNNNL