| New model in OGS2.0 | DPOGS202831 |
|---|---|
| Genomic Position | scaffold228:- 86879-88895 |
| See gene structure | |
| CDS Length | 1719 |
| Paired RNAseq reads | 233 |
| Single RNAseq reads | 573 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010503 (4e-136) |
| Best Drosophila hit | CG9203 (4e-65) |
| Best Human hit | zinc finger RAD18 domain-containing protein C1orf124 isoform a (1e-69) |
| Best NR hit (blastp) | PREDICTED: similar to Zinc finger RAD18 domain-containing protein C1orf124 [Tribolium castaneum] (3e-90) |
| Best NR hit (blastx) | PREDICTED: similar to Zinc finger RAD18 domain-containing protein C1orf124 [Tribolium castaneum] (5e-92) |
| GeneOntology terms | GO:0003677 DNA binding GO:0006281 DNA repair GO:0000003 reproduction GO:0040007 growth GO:0002119 nematode larval development |
| InterPro families | IPR006640 Domain of unknown function SprT-like IPR006642 Zinc finger, Rad18-type putative |
| Orthology group | MCL13369 |
Nucleotide sequence:
ATGAACTTAGCAGACCCGGAATTGGAGCTCATAGACCCGACACCCAATGTTCATATGCTG
TTTATACAATTCGACAAAATATTCTTTTATACGAAACTTGCAAGCAGAGCTGTGGTGCGA
TGGAGTAAAAGAATGTATTCTTGTGCTGGGATATGTTCGTATGATAGGGGAGGACTCTGT
GATATAGCTCTCAGTGAACCCCTGCTGAAGTTGAGGCCTCGCAAGGATCTAATTGAGACA
CTTCTGCATGAAATGATTCATGCATACCTGTTCGTCACATGTCAGGATCAGGACAGAGAT
GGTCACGGACCCAATTTTAAGTCACACATGTATAGAATCAACAGTGCAGCCGGCCTCAAC
ATCAGTATCTATCATGATTTTCATGATGAGGTGAAACTTTACCAAACGCACTGGTGGAGA
TGTGATGGTCCATGTCAATCAAGGAAACCACACTTTGGTATTGTCCGTAGAACTAACAAC
AGAGCTCCAGGACCTTCAGATTACTGGTGGAACGATCATTTAAGAAAATGCGGAGGTACC
TTCATTAAGATAAAAGAACCGGAAAATCAAGGTAGGAAAAAAGCAGTCCCTAAAGTTAAT
AAAGGAGATATCACAAAATACATCAACAATAAAGATAAAATAAAGGGTGTCCCAGGTGAC
AAATTGACCAAACCAATATTGAAAGATAATAATATGATAAAAAATAATTCAGTAACCAAG
AGTAATGGCAGCGGGACAGTTGTTGTTACTAAAAAGAACAATGTGGTGATTAATCCAAAG
CCAAACAAACAAATTGAACTCTTCAGCGGAACAGGACACACATTGAGCGGGAAGACCACA
ACACTCCTGGATATTGCCGAAACTGTTAGAAGTATTTGGGCAAATAAAGAGATACCCACC
ATGGCACCCGATAGAAAAGAAGTTAAAGGTATGGTAGGTAGAAAGAATGAGAATTCCGTA
TCTGGTAATAAGCATAAAAGTGATAGTTCCAATCAATATTCTCCCCCCATGAAAATTAAG
AAAATTGATGATTACTTCAAAAAGAGCGCCAAAAATGTCTTAAAGGATATCTATGGACAA
GACTTTGATATAAAAGAAGTTAATGCAAACAAGAGATTGTCTGTGGTGGCAGTTGAAAAT
GACTTAGTTGATTGTCCTGTTTGCAGTCAAAAAATTGCCAGTAATCAAGTTAACCAACAT
TTAGATGAGTGCCTTAATAAAGATATAATAGAAAAGATATCCAAAGATAGCATTCAGCCT
GTGATATTTAGTGAGATAAGCAATAAAGATGTCGAAAACCCAAAAATAGAAGTCAGTAAA
ACAAATGACGTCAAAGAAACTTGTAGACAAATAAATAAAAAGTCAAAGATAAAAAATGAA
ACCGGTGTACAAATTAAAATGGAACCCGGGACTAGCAGGGACGTAGAAGTCGAAGCTGGA
ACGAGCAAATCACTTAATGAACAGAAATGTCCATGCTGCGAAAAAAACATAAACAACACT
ATGGATGAACATCTGGATGAATGTTTAGCTTTGTTCAGTGATCCGACAACAGCGCCCGCC
GAGGGTGACACCAGTTTGATAGAAACCATTGAAATTGAAGATGATCTGGATGAATCTCTG
ACCTTCAACTCCACCGGCACCAAATGCCCTTGTCCCTGCTGTCTCCAAATGATTGAGCAA
GCCGATATGAATTCCCATTTAGATTCATGTTTGAGTTGA
Protein sequence:
MNLADPELELIDPTPNVHMLFIQFDKIFFYTKLASRAVVRWSKRMYSCAGICSYDRGGLC
DIALSEPLLKLRPRKDLIETLLHEMIHAYLFVTCQDQDRDGHGPNFKSHMYRINSAAGLN
ISIYHDFHDEVKLYQTHWWRCDGPCQSRKPHFGIVRRTNNRAPGPSDYWWNDHLRKCGGT
FIKIKEPENQGRKKAVPKVNKGDITKYINNKDKIKGVPGDKLTKPILKDNNMIKNNSVTK
SNGSGTVVVTKKNNVVINPKPNKQIELFSGTGHTLSGKTTTLLDIAETVRSIWANKEIPT
MAPDRKEVKGMVGRKNENSVSGNKHKSDSSNQYSPPMKIKKIDDYFKKSAKNVLKDIYGQ
DFDIKEVNANKRLSVVAVENDLVDCPVCSQKIASNQVNQHLDECLNKDIIEKISKDSIQP
VIFSEISNKDVENPKIEVSKTNDVKETCRQINKKSKIKNETGVQIKMEPGTSRDVEVEAG
TSKSLNEQKCPCCEKNINNTMDEHLDECLALFSDPTTAPAEGDTSLIETIEIEDDLDESL
TFNSTGTKCPCPCCLQMIEQADMNSHLDSCLS