New model in OGS2.0 | DPOGS214798  |
---|---|
Genomic Position | scaffold806:+ 37408-38217 |
See gene structure | |
CDS Length | 810 |
Paired RNAseq reads   | 135 |
Single RNAseq reads   | 486 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012039 (7e-86) |
Best Drosophila hit   | CG7650 (8e-55) |
Best Human hit | phosducin-like protein (3e-49) |
Best NR hit (blastp)   | conserved hypothetical protein [Ixodes scapularis] (6e-74) |
Best NR hit (blastx)   | conserved hypothetical protein [Ixodes scapularis] (1e-58) |
GeneOntology terms    | GO:0007602 phototransduction GO:0005575 cellular_component GO:0003674 molecular_function |
InterPro families    | IPR012336 Thioredoxin-like fold IPR001200 Phosducin IPR023196 Phosducin, domain 2 IPR012335 Thioredoxin fold |
Orthology group | MCL14842 |
Nucleotide sequence:
ATGGCTACTTTGGAGGACAAAATATTGGGAGAAAAACTTCATAACTACTGTAGTAGTAGC
GAAGATGAAGGAGGTTCCGATGATGAAGATTGCCAAAGCTCAGATGAGAAAGAAAATTCT
TTAAAGAGATGCCAGGAGCCATCGGAACCACCGCCTGTTAATAATTGGAGCGGTTCAGCA
ACCAATACAGGCCCAAAAGGAGTTTTAGAAGATTGGAGAAGATTTAAAGAGTTAGAAGCA
CAGAACAGAGAGGAGTTAGCCAAAGAGCGCATTGCTCTAGCTAAAAAACTCACTATGACG
GTAAAAACAGTTCAAGAAGAGGATAAAGAAAAAGAAATCGATGAGTTAGAAGACGAGTTA
GATGAATTAATTGATGAAGGTTTTCTTATGAAGTACCAACAACAAAGAATGCAGGAACTC
ATGGCGCAGTTACAAAAAGCGCCTAAATTTGGCAAGCTTCAAACGCTGAAAAACCAGGAT
GATTTCTTGAGTGCTATTGATAAGGAAGACGTGAAAGTAACAGTGGTTATACATATATAT
GGACACAATGTCAAAGCTTGTGAGAGCATGGACGGTTGTTTAAGTATATTGGCATCAGAT
TATCCGGCAGTAAAATTTTGTAGAATAGCAGTGGATGTAGCTGGTTTGAGTCGTCACTTT
AGTGTAGAAGGTGTGCCAGCACTACTTGTGTATAAAGGCGGACAGATTATTGGTAATTTT
GTTCAGTTAGCAACAGAACTCGGTAATGATTTCTTTGCTTCAAATGTAGAAAAGTTTCTC
ATAGAATATGGTATGCTGCCTGAAAATTAA
Protein sequence:
MATLEDKILGEKLHNYCSSSEDEGGSDDEDCQSSDEKENSLKRCQEPSEPPPVNNWSGSA
TNTGPKGVLEDWRRFKELEAQNREELAKERIALAKKLTMTVKTVQEEDKEKEIDELEDEL
DELIDEGFLMKYQQQRMQELMAQLQKAPKFGKLQTLKNQDDFLSAIDKEDVKVTVVIHIY
GHNVKACESMDGCLSILASDYPAVKFCRIAVDVAGLSRHFSVEGVPALLVYKGGQIIGNF
VQLATELGNDFFASNVEKFLIEYGMLPEN