| New model in OGS2.0 | DPOGS215782 |
|---|---|
| Genomic Position | scaffold1007:- 73244-76956 |
| See gene structure | |
| CDS Length | 3291 |
| Paired RNAseq reads | 762 |
| Single RNAseq reads | 2007 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005056 (1e-44) |
| Best Drosophila hit | armitage, isoform A (1e-163) |
| Best Human hit | putative helicase Mov10l1 isoform 1 (2e-104) |
| Best NR hit (blastp) | PREDICTED: similar to armitage CG11513-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay GO:0005737 cytoplasm GO:0007317 regulation of pole plasm oskar mRNA localization GO:0007319 negative regulation of oskar mRNA translation GO:0000578 embryonic axis specification GO:0016325 oocyte microtubule cytoskeleton organization GO:0016246 RNA interference GO:0003678 DNA helicase activity GO:0030425 dendrite GO:0043025 neuronal cell body GO:0007616 long-term memory GO:0030424 axon GO:0045202 synapse GO:0031023 microtubule organizing center organization GO:0046843 dorsal appendage formation GO:0007318 pole plasm protein localization |
| InterPro families | ND |
| Orthology group | MCL12111 |
Nucleotide sequence:
ATGTTTTTAGCTGAAGAACTTTTACAATTAGAGTTTGAAGCCGAAAATGAAGCATCCATG
ATTAATCACTCGTACCCTGTTGAACCTCCTAAGCTTGCCGCCGGTGCAGTTTGTTTTCAA
AAAACTGGTATTATAACAGATTGTGGTGATGACTATGTCCTCATTGATGGAATGTTATAT
TTTGCAACACAGAACTCACTGAGTTATAATGTCAATGACAAAGTTCTATATCTTGGTTAC
AAGGATTCAAATGATTCAATAAATGTTGTAAGAATATTGGAAAACCAAGGCTTATTTTGG
GGTGACGAGGATGAAGAAGATGTTGAAAACTTCAATACTATTGAGCACATCTTAATAGGT
CAAGTAGATTATAGAGAAGAACGGATGGTTTACATTGTGGACAGTGACTTGAAATTCAAC
TTAGACAATGTTGCCGGAACATTTGTTCCAATTAAAGGTGATTGGTTGGAAATGAAATGT
ACAGTACAACAAAATGAAAAGAGACCTGTGGATATCAACACAAAACAAGTGAAATCCTTT
AATGCTATAAGAACCAAAACGAAGACGGCCATAGTTACTCAGTGGTCTGGAAGTGAAGGG
GTTTGTGATAGACAAATATATATCAATAATAGTGCATTGGTCAATGGATCACAAATAAAT
ATTGGCACGAAGGTCATGGTAGAAGCAATTGAAAGCAATCAAGGATTGTGCACATGGAGG
GCACTGAAATTAATGACTCTCGAAATTGGGTCCGAGAAGAATGTGGCAGAGGAATCAAAC
GAAGGTCAAATTAGTCTGGCCCTAGAAAAAGAAAAAAAAATTCATATGACATACCCATTA
AAGTTTGAGAATGTTAAATTTGATCAAACAGAGAGTATAATATTAAATATAACAAATAAG
AGCAACAATATGTACATACTAAATAAGTGGATAGTGCTGAGTAAGAAACGAGATTCACAA
GTCTGTATAACGCCATTCATCAATCAACCAATAAAATTATCACCAGAAGAAAATATCAGC
TTCACTATAACATGCTCTCCAAAGTTCATGGGATATGCACAGGAGTGCCTCGTTATATTG
TTTCGAGGTTTCCAACTGAAGAGACATATCAATATACATGTGTGCAGTGATCACCGACAA
GTTAATTTTGATTTAAATGGTGATTGCCATATAATGGAATCAGATAAAGCTGATATGATG
AGAAAAATTAGACGCAATACTAATTCATATGTACCAGGTGTGAAACCAATCAAATCACCA
GCTTTCGTATCCGTGAAAATTGGTAATTTTCCTATCCCAGACAAAATCTGGGCTGTTGTC
TTGGGCGATTCCAAGCAGACCATCTGTAGCAATGATTTCAATAGGGTATTATCCTTCATT
GAAAGACAGCTACCTTATTTATCTCAAGATTTGAATATTACAAATTATATTGATAAATGG
CACGCCCTTTTGTACATGGAAGAAATACAAGCTAACCTCAATATGCGTGTTTACGACAGG
TCAAAGGTATTCTTGGTACATTGTGACGAATATCTTGGCATTGAAATACCAGGGTTGTCA
GAAAAGAGACCGTCGCTCATCAAAGGAGACAGGGTCATTGTGAAAGATATTTGGAACGAA
TCCAATCCGGAATACGAAGGCTATATACATGCAATAAACGGTGATATGGTACTGATGAAA
TTCAACAGCAGATTTCATGAATATTACAGCGGCAGTGATGTTTCGATTGAGTTCCACTTT
AGTAGGGCTGTGTATAGACGATCGCACCATTGCATCAACCAAGCCCTATCAAATTTAGGG
CCGGACATCCTATTTCCGTCTCGTGTTATAACTAAAGAATCTCAAGTGTCCAATGACGTT
TTGGAAGATATGAAATGGTTTAACCCAACTTTAAATAAGGATCAGAGAAATGCAGTGATT
AATATATTGAAAGGCGAATGCCGACCGATGCCTTATATCATCTTCGGACCCCCTGGTACT
GGGAAGACTGTAACTGTCATAGAAACTATTTTGCAAATTTTAACCTTAATACCAGACAGT
AGGATTTTAGTTGCGACACCGTCAAACAGTGCGTCAAATTTGATAACTGAAAGACTTATA
AAATACAAGGACTCGTTCTCAGGATCAGTCGTAAGATTAATCGCTAACTATCTAGTTGAT
TCTGACACCATACCAGAGGATGTGAAGCCATTTTGTGCCACATTGGATATAGCCAAAGAG
AATACAACAAAATCGAAACATTACGTCAAGGATAACATACAACTTAATTGTCAGAAATCT
TTAATAGTCAGGCATCGTGTCACTATAGGGACGTGCTATTGTTTAGGATCTTTAAAACAT
TTAGACATACCTCGAGGTCACTACACTCATATCATTGTGGACGAAGCTGGTCAGGCTACA
GAGCCGGAGATAATGTTACCTTTGACCTTCACCAATAAGGAACATGGACAAATTATACTC
GCAGGGGATCCTATGCAATTAGGACCTGTCGTTATGTCAAAATATTGTAAGGAGTTTGGA
CTGGACGTATCGTTCCTGTGCAGACTTCTAGAGTGCTTCCCATACTTGAAGGATTATGAA
TCTTACGCTTGCGGTTTCGATAAACGTCTCGTCACCAAATTGAATGATAACTATAGGTCG
CTGAAGGAAGTTTTAACATTACCGAGTGAAATGTTTTACGATGGGACATTAGTGCCAAAT
GTAGACAAAAGTATGCCCTGGACAGAGAAATTCATTGATGCGACTTGTCAGATTTTCGGT
TCGGATGATAGGAACGGCGGGATATTCGTATATGGTATTAAAGGAACCAACATGCGAGCA
CAGGACAGCCCGTCCTGGTACAATCCACAAGAAGCGGCGATGGTCGCATTGACGACCTGT
AAACTGTTTAAGAAGAACATCACCGAAGAGGAAATTGGCATAATCACACCATATATAGCA
CAGACAAAATATCTACGTTTGCTTTTCGATTCCATGGGCTTGAATCAACCAAAAATTGGC
ACTGTTGAAGACTTTCAAGGTCAAGAACGACCGGTAATTTTAATTTCAACCGTTAGATCC
AGCGAGTCGCACCTGGAGGAAGATGCCAAACATTATTTAGGTTTTGTTAAAAGCCCGAAA
AGACTAAATGTAGCTCTGACCCGGGCACAAGTGTCAGTTATATTATTTTGCAATCCACAT
CTATTGTCCAAAGACCATTTGTGGAGAAAAGTTATAAGTTACGCCGTCTCTAGTGATAAG
TATATGGGCTGTGATTTGCCAACCAGCCTCTTAAACAATTTATCTTTATGA
Protein sequence:
MFLAEELLQLEFEAENEASMINHSYPVEPPKLAAGAVCFQKTGIITDCGDDYVLIDGMLY
FATQNSLSYNVNDKVLYLGYKDSNDSINVVRILENQGLFWGDEDEEDVENFNTIEHILIG
QVDYREERMVYIVDSDLKFNLDNVAGTFVPIKGDWLEMKCTVQQNEKRPVDINTKQVKSF
NAIRTKTKTAIVTQWSGSEGVCDRQIYINNSALVNGSQINIGTKVMVEAIESNQGLCTWR
ALKLMTLEIGSEKNVAEESNEGQISLALEKEKKIHMTYPLKFENVKFDQTESIILNITNK
SNNMYILNKWIVLSKKRDSQVCITPFINQPIKLSPEENISFTITCSPKFMGYAQECLVIL
FRGFQLKRHINIHVCSDHRQVNFDLNGDCHIMESDKADMMRKIRRNTNSYVPGVKPIKSP
AFVSVKIGNFPIPDKIWAVVLGDSKQTICSNDFNRVLSFIERQLPYLSQDLNITNYIDKW
HALLYMEEIQANLNMRVYDRSKVFLVHCDEYLGIEIPGLSEKRPSLIKGDRVIVKDIWNE
SNPEYEGYIHAINGDMVLMKFNSRFHEYYSGSDVSIEFHFSRAVYRRSHHCINQALSNLG
PDILFPSRVITKESQVSNDVLEDMKWFNPTLNKDQRNAVINILKGECRPMPYIIFGPPGT
GKTVTVIETILQILTLIPDSRILVATPSNSASNLITERLIKYKDSFSGSVVRLIANYLVD
SDTIPEDVKPFCATLDIAKENTTKSKHYVKDNIQLNCQKSLIVRHRVTIGTCYCLGSLKH
LDIPRGHYTHIIVDEAGQATEPEIMLPLTFTNKEHGQIILAGDPMQLGPVVMSKYCKEFG
LDVSFLCRLLECFPYLKDYESYACGFDKRLVTKLNDNYRSLKEVLTLPSEMFYDGTLVPN
VDKSMPWTEKFIDATCQIFGSDDRNGGIFVYGIKGTNMRAQDSPSWYNPQEAAMVALTTC
KLFKKNITEEEIGIITPYIAQTKYLRLLFDSMGLNQPKIGTVEDFQGQERPVILISTVRS
SESHLEEDAKHYLGFVKSPKRLNVALTRAQVSVILFCNPHLLSKDHLWRKVISYAVSSDK
YMGCDLPTSLLNNLSL