New model in OGS2.0 | DPOGS215633  |
---|---|
Genomic Position | scaffold1007:+ 78833-80405 |
See gene structure | |
CDS Length | 693 |
Paired RNAseq reads   | 57 |
Single RNAseq reads   | 247 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | CG10419 (1e-11) |
Best Human hit | survival of motor neuron protein-interacting protein 1 isoform beta (7e-15) |
Best NR hit (blastp)   | PREDICTED: hypothetical protein [Nasonia vitripennis] (6e-29) |
Best NR hit (blastx)   | PREDICTED: hypothetical protein [Nasonia vitripennis] (1e-25) |
GeneOntology terms    | GO:0000245 spliceosome assembly GO:0005737 cytoplasm GO:0005622 intracellular GO:0005634 nucleus GO:0005515 protein binding |
InterPro families   | IPR007022 Survival motor neuron interacting protein 1 |
Orthology group | MCL15631 |
Nucleotide sequence:
ATGTCACCGTGTTTGCAAATAAGTCAAGATATTGAATTAAAAGACATTCCTTCGAATGGG
GAAGAGTATCTTCTAAAAGTTATGAAAGAAAGGCAAAATTATTCAACAGTTACAACTTGT
AACAGGGATTTTTCCAAGTTTGCCCGAAACCAATCATGTTTCGTTAAGGAGTTACCACAT
GCTAAAGCACCAGAGAGTCTAAAACCAACTATAGAATGGCAAAATATTCAAGTTGCTGAT
TTCTCAAAGGTTAGAATGTACATTTCAAAGTTGATATCTAATAGATCACTTTGGCCTAGA
GATGTTATAAATATAGAAATAGATCCAGACAACATTGCAGCTTGGATGAACTTATTTGAG
AATAAAGACCCAAAGCTTTCTTGTGTGCTTGGCTTGCATCATGCATTGTTAGACCATGGC
CTGGAGATTCTCATTGAAATGCTGGATAAAGTCAAACCTGGCAGTACAATAAACTATAAA
ACAGGTCAATGGATTTACGCATTTTTAGCCTGCACCAGACAACCTTTGCTCTCTGACACT
ATAAGTATATTAAGAAACCTAGCTAGAAAATGTGCAGAGATTAGATCTCATCTCAATACA
GAGGATGTGAGTTCCAGGGAGGCGGCCGCTCCATTAAACATATTTATATGCTTGGTAGCT
CGATACTTCAGACAATATGATCTTGCTGATTGA
Protein sequence:
MSPCLQISQDIELKDIPSNGEEYLLKVMKERQNYSTVTTCNRDFSKFARNQSCFVKELPH
AKAPESLKPTIEWQNIQVADFSKVRMYISKLISNRSLWPRDVINIEIDPDNIAAWMNLFE
NKDPKLSCVLGLHHALLDHGLEILIEMLDKVKPGSTINYKTGQWIYAFLACTRQPLLSDT
ISILRNLARKCAEIRSHLNTEDVSSREAAAPLNIFICLVARYFRQYDLAD