New model in OGS2.0 | DPOGS214201  |
---|---|
Genomic Position | scaffold49:- 176500-178848 |
See gene structure | |
CDS Length | 2100 |
Paired RNAseq reads   | 663 |
Single RNAseq reads   | 1765 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006225 (3e-67) |
Best Drosophila hit   | GM130, isoform A (3e-17) |
Best Human hit | ND |
Best NR hit (blastp)   | golgin-80 [Manduca sexta] (2e-147) |
Best NR hit (blastx)   | golgin-80 [Manduca sexta] (8e-154) |
GeneOntology terms    | GO:0000137 Golgi cis cisterna GO:0005783 endoplasmic reticulum GO:0007030 Golgi organization GO:0005795 Golgi stack |
InterPro families   | ND |
Orthology group | MCL13367 |
Nucleotide sequence:
ATGGATATAAGAGCCGAAAAACTAGCAAATGCTCGGAAAAAGTTAAGAGATCATCAAGTA
AAGAAAACTGTAAACTTAGTTCAGCCTTCTGAAAAACAACAACAGACAACAGAAAAACCA
ACACCCGAAATTGAGAATCCTCAAAAGGCAAATTACTATGAAATTCCTGAAGGACAATTT
AGTGCAGAAGGTATACAACCTAACATTGGAGCCAGTACACAAAACAAAAGTATCGATAAC
TTACCGGTTCAAAATCCGGAGGTAAATGTAACCGAAATTCTTATCGCTAATAATGCCAAT
CTTGAGATGCAAATAAAAAATTTTACTGAGAAGTTAGCACATTTAGAATATTTGTATGGC
TCAGAAGTGTCTAGTCACAATACTTCTAAACAAAGGATTATTAATCTAGAGAGTGAACTC
TCCGATTTATCAAGCAGATATTTAAAAGTTGAACAAGATATGCAACAGAAAAATAGGGAA
TTTAATGATTTACAAGTCTTGTATAATTCTTTTGTGGAAGCAAATAACAATTTATCAGAA
CAAGTTGAATTTACGAAGTCAATGCTTACAGCAAAGGAATCAGAAAACACTCACTTACAG
AGTCAAATAAATAATTATCATAATCAGTTAGACTCTGCTATGCTGCAGATACAACAGCTG
ACAAATAACAGTAGTATTATGCAGGCCCCTACAAACAATTCTGTGGAAGAAATTGAATTA
TTAAAAAAAAAGATATCTGCTTTAGAGCAACAAACAGTTGTCCTACAAAAAGAGAGAGAT
AATAAGAATTCCCATTATGAACATTATGTAAAAGAACTAACTGAACAACTAAAAAATGAA
GTAAATAAAAATGAGAGTCACTTACAAACAATTCAGAACCTCTACAATAGGGAAAATAGT
CTCATAGAGCAGATAAGTGATATGGAAATAAGACTACAAAATTACCAGAAGAGAATTGAA
AATGAAGTTATAAAAGTAGAACATGTTGATAATAGTCAGGAATTACAGGATAAATATAAT
GATATCAAGAAACAGCTCGAAGATACTAAACTGAAACTTAGCAATCTTCAGGAGGAATAT
GCAAAAAGTATTGAAACAATTCAAGAATTATCGGCTTCTAAAGAAGTAGTTTGTGATCAT
GACAACATTAGTATATCAAAATTGAATGCTGATATAGCAAGTGATAAACTGGCAGCTCAG
AGAGCAACAGAACAAAACAGAAAGTTAAAACAGGATGTTGAGAATTTAGAACAGGTTGTA
GTTAAAATTAATAAAGATAAGTTAGAGTTAACTGAAAAATTAACACATGAAAAGCAATTA
AACAAAGATATTGTTTTAAAATTGGCTGAAGTTGAAGAAAATGCTAAAAACATGACAAAA
TTATTAAAAGCAAAGGATAGCGAAATGATAAGGCTGCAAAATAATAACAGAGAAATTGAA
AAGAAATACGAAGACATTTTGCAAGATATGAATCATATGAAACATGTCACAAGTGTAGAA
CACAACCATGAAGCAGTCGGCGAGATTTCCAATAATAACTGTTACAATGAAGAGACATCA
CTAATTCCAGCTCATAACTGTATGGAAACTAGTAACGAAATAGCAGAATTAGACATAAAA
CATGAACAAAAATTTATACCTAAAGAAGATGCAATGGTTAAGCTTCAAGAACGCTTTCTT
AATATAATGGATGAAGTAGCAAATTTATCTGATGAGAAACATAGGCTAGAACACATAATT
CTCCAACTACAAAATGAAACTGAGACTATATGTGAATATGTGGCACTTTATCAGCAGCAG
AGGAGTTTATTAAAGAAACGTGAAGAAGAAAGAAGCAACCAGCTGAAAATATTCCAAAGC
GAATGTGATCTGCTCAAATCTCATTTGGAAGCTCTTCGTGAATTATTATTACGATTAGCA
GCGGATGAAGAATTGGATTCATATTTGAAAGACGAAGCAAGATTTAACGATATAATTAGG
GTTAAAGACTTACTTGAAAAGTTGCAAAACTGTTCATTAATAAATCCCAAGTACAATACA
TTAGATCTTAATATTTTTTACCCTTGTAATTGTTGCTCTGGACAACTTATTACCATTTAG
Protein sequence:
MDIRAEKLANARKKLRDHQVKKTVNLVQPSEKQQQTTEKPTPEIENPQKANYYEIPEGQF
SAEGIQPNIGASTQNKSIDNLPVQNPEVNVTEILIANNANLEMQIKNFTEKLAHLEYLYG
SEVSSHNTSKQRIINLESELSDLSSRYLKVEQDMQQKNREFNDLQVLYNSFVEANNNLSE
QVEFTKSMLTAKESENTHLQSQINNYHNQLDSAMLQIQQLTNNSSIMQAPTNNSVEEIEL
LKKKISALEQQTVVLQKERDNKNSHYEHYVKELTEQLKNEVNKNESHLQTIQNLYNRENS
LIEQISDMEIRLQNYQKRIENEVIKVEHVDNSQELQDKYNDIKKQLEDTKLKLSNLQEEY
AKSIETIQELSASKEVVCDHDNISISKLNADIASDKLAAQRATEQNRKLKQDVENLEQVV
VKINKDKLELTEKLTHEKQLNKDIVLKLAEVEENAKNMTKLLKAKDSEMIRLQNNNREIE
KKYEDILQDMNHMKHVTSVEHNHEAVGEISNNNCYNEETSLIPAHNCMETSNEIAELDIK
HEQKFIPKEDAMVKLQERFLNIMDEVANLSDEKHRLEHIILQLQNETETICEYVALYQQQ
RSLLKKREEERSNQLKIFQSECDLLKSHLEALRELLLRLAADEELDSYLKDEARFNDIIR
VKDLLEKLQNCSLINPKYNTLDLNIFYPCNCCSGQLITI