New model in OGS2.0 | DPOGS214164  |
---|---|
Genomic Position | scaffold49:+ 38928-39397 |
See gene structure | |
CDS Length | 294 |
Paired RNAseq reads   | 99 |
Single RNAseq reads   | 2111 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006209 (9e-18) |
Best Drosophila hit   | Sec61beta (2e-11) |
Best Human hit | protein transport protein Sec61 subunit beta (1e-11) |
Best NR hit (blastp)   | transport protein Sec61 beta subunit [Bombyx mori] (8e-38) |
Best NR hit (blastx)   | transport protein Sec61 beta subunit [Bombyx mori] (2e-17) |
GeneOntology terms    | GO:0005515 protein binding GO:0000060 protein import into nucleus, translocation GO:0030433 ER-associated protein catabolic process GO:0030970 retrograde protein transport, ER to cytosol GO:0031205 endoplasmic reticulum Sec complex GO:0048408 epidermal growth factor binding |
InterPro families    | IPR016482 Preprotein translocase Sec, Sec61-beta subunit, eukarya IPR005609 Preprotein translocase Sec, Sec61-beta subunit |
Orthology group | MCL14942 |
Nucleotide sequence:
ATGCCAGCCGCACCAAGCTCTACATCTGTGGGATCTGGAGGCCGATCGCCAACCAAGGCA
ACTGGTGTTCCACGTTCGTCAACCGGAGGCACTGTGAGACAACGTAAGTCAACCACGACA
ACAACAGCAGCCAGGAATCGCAGCACTGGTGCTGGAACCGGTGGAATGTGGCGTTTTTAC
ACTGATGACTCCCCCGGCGTCAAAGTAGGTCCTGTGCCTGTACTTGTCATGTCTCTGCTA
TTCATTGCATCTGTGTTTATGCTGCACATTTGGGGAAAATACACCAGGGCCTAA
Protein sequence:
MPAAPSSTSVGSGGRSPTKATGVPRSSTGGTVRQRKSTTTTTAARNRSTGAGTGGMWRFY
TDDSPGVKVGPVPVLVMSLLFIASVFMLHIWGKYTRA