| New model in OGS2.0 | DPOGS214167 |
|---|---|
| Genomic Position | scaffold49:+ 89727-96054 |
| See gene structure | |
| CDS Length | 1617 |
| Paired RNAseq reads | 24457 |
| Single RNAseq reads | 59320 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006213 (0.0) |
| Best Drosophila hit | serpentine (0.0) |
| Best Human hit | ND |
| Best NR hit (blastp) | chitin deacetylase 1 [Helicoverpa armigera] (0.0) |
| Best NR hit (blastx) | chitin deacetylase 1 [Helicoverpa armigera] (0.0) |
| GeneOntology terms | GO:0006030 chitin metabolic process GO:0005576 extracellular region GO:0035159 regulation of tube length, open tracheal system GO:0008061 chitin binding GO:0007424 open tracheal system development GO:0004099 chitin deacetylase activity GO:0005737 cytoplasm |
| InterPro families | IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site IPR002557 Chitin binding domain IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR002509 Polysaccharide deacetylase IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel |
| Orthology group | MCL10363 |
Nucleotide sequence:
ATGGCGCGCTACGCCCGTGTCGCTCCTCTGCTCGCGTGTTTCTTTTTCGCCTGCGCGGCC
GCTAATAACGGTGCCCACCGTTGGCGTCGTCAGGCAGATGCCAAGAGTGAGGACCAGAAT
AGTGAGATATGCAAGGACAAGGACGCTAGCGAATGGTTCCGGCTGGAGATCGGCGAGGGC
GACGCCTGCCGCAGCGTCATCCAGTGCACCGCCTCGGGCATTGAAGGTATTAAGTGCCCA
CCCGGTTTATATTTCGATATTGAAAAACAAACCTGTGACTGGAAAGATGCCGTAAGAAAC
TGTAAAGTAAAGAGCAAAGAACGCAAAGTAAAACCTCTTCTTTATACTGAGGAACCACTT
TGCCAAGACGGCCTACTTGCCTGTGGGGATGGCATTTGTATAGAACATGGCCTTTTCTGT
AATGGCGAATTAGATTGTAACGATGGATCAGACGAAAACTCTTGCGACATCAACAATGAC
CCCAACAGTGCTCCTCCTTGCGACACATCTCAGTGTACATCACCTGACTGTTTCTGCTCT
GAAGACGGAACCGTAATCCCCGGTGATCTGCCCGTAAAGAACGTACCTCAAATGATAACC
ATTACTTTTGATGACGCTATTAACAACAACAACATTGATTTGTACAAAGAAATTTTCAAT
GGCAAACGTAAAAATCCTAACGGTTGCGACATTAAGGCGACATACTTTATTTCACACAAA
TATACTAACTATTCAGCTGTTCAGGAAACTCACAGAAAGGGTCACGAAATCGCCGTACAC
TCTATCACCCACAATGATGATGAACGCTTCTGGAGCAATGCTAGCGTTGATGATTGGGGT
AAGGAAATGGCTGGTATGAGAGTTATTATAGAAAAGTTTGCAAACATAACCGACAACAGC
GTAGTTGGAGTTCGTGCACCTTACCTACGAGTTGGAGGCAACCGTCAATTCACCATGATG
GAGGAACAGGCCTTCTTATACGACAGCACCATCACCGCTCCTTTATCCAATCCTCCTCTA
TGGCCTTACACTTTGTACTACCGCATGCCCCATCGCTGCCACGGTAATTTACAAAATTGT
CCCACTAGAAGTCACGCTGTTTGGGAAATGGTAATGAATGAGCTCGACCGTCGTGAAGAC
CCAAGTAATGACGAATACTTACCAGGATGTGCTATGGTTGATTCTTGCTCGAACATTCTT
AGTGGTGATCAATTTTACAACTTCCTTAACCATAACTTCGACCGGCATTACGATCAAAAC
AGAGCTCCATTAGGTCTTTACTTCCATGCTGCTTGGTTGAAAAATAACCCTGAATTCTTG
GAAGCATTTTTATACTGGATTGACGAAATCCTTCAGACTCACGATGATGTATACTTTGTA
ACAATGACTCAAGTAATCCAATGGATTCAAAACCCACGTTCTGTTTCTGAAGCAAAGAAC
TTCGACCCATGGCTAGAGAAGTGTTCCGTAGAAGGTATCCCAGCATGCTGGGTGCCTCAC
TCTTGCAAACTTAACTCTAAGGAACTCCAAGGTGAGACCATTAATCTTCAGACATGTCTC
AGATGCCCAGCCAATTACCCATGGCTCAATGATCCAACGGGTGAAGGTCATTATTAA
Protein sequence:
MARYARVAPLLACFFFACAAANNGAHRWRRQADAKSEDQNSEICKDKDASEWFRLEIGEG
DACRSVIQCTASGIEGIKCPPGLYFDIEKQTCDWKDAVRNCKVKSKERKVKPLLYTEEPL
CQDGLLACGDGICIEHGLFCNGELDCNDGSDENSCDINNDPNSAPPCDTSQCTSPDCFCS
EDGTVIPGDLPVKNVPQMITITFDDAINNNNIDLYKEIFNGKRKNPNGCDIKATYFISHK
YTNYSAVQETHRKGHEIAVHSITHNDDERFWSNASVDDWGKEMAGMRVIIEKFANITDNS
VVGVRAPYLRVGGNRQFTMMEEQAFLYDSTITAPLSNPPLWPYTLYYRMPHRCHGNLQNC
PTRSHAVWEMVMNELDRREDPSNDEYLPGCAMVDSCSNILSGDQFYNFLNHNFDRHYDQN
RAPLGLYFHAAWLKNNPEFLEAFLYWIDEILQTHDDVYFVTMTQVIQWIQNPRSVSEAKN
FDPWLEKCSVEGIPACWVPHSCKLNSKELQGETINLQTCLRCPANYPWLNDPTGEGHY