| New model in OGS2.0 | DPOGS214168 |
|---|---|
| Genomic Position | scaffold49:+ 105153-108906 |
| See gene structure | |
| CDS Length | 1698 |
| Paired RNAseq reads | 20974 |
| Single RNAseq reads | 72636 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006214 (0.0) |
| Best Drosophila hit | vermiform, isoform B (0.0) |
| Best Human hit | low-density lipoprotein receptor-related protein 6 precursor (6e-06) |
| Best NR hit (blastp) | AGAP011937-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | AGAP011937-PA [Anopheles gambiae str. PEST] (0.0) |
| GeneOntology terms | GO:0005041 low-density lipoprotein receptor activity GO:0006030 chitin metabolic process GO:0005576 extracellular region GO:0008061 chitin binding GO:0004099 chitin deacetylase activity GO:0007424 open tracheal system development GO:0035159 regulation of tube length, open tracheal system GO:0035001 dorsal trunk growth, open tracheal system GO:0060439 trachea morphogenesis GO:0007632 visual behavior |
| InterPro families | IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site IPR002557 Chitin binding domain IPR002172 Low-density lipoprotein (LDL) receptor class A repeat IPR002509 Polysaccharide deacetylase IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel |
| Orthology group | MCL10363 |
Nucleotide sequence:
ATGCAACAATTTGTAATGAAGTATAATAAAAAATACATACTTAAGGCACAAGACGATGAC
GGTGATGATGAACAGAATCCTGAACAGCTTTGTGACGGACGTCCTGGAGATGAATACTTT
AGATTGTCTACCGAAGGCGATTGCCGAGAAGTAGTTCGGTGTGACAAAGGAGGTGAAAAT
GGCGTCACAAGGCTCGCTTCAGTGCGCTGCCCTGGTGGACTAGCATTCGATATCGACCGC
CAGACATGTGATTGGAAAACACATGTTAAGAATTGTGATAAACTAGAAAGTCTTAAACAG
ATCACATGCCCGTCTGGACTGTCTTTCGATCTTGATAAACAAACCTGCGACTGGAAGGGT
AAAGTGACCAACTGTGACAAAATTGAGAAACCAAGAAAAATTCTGCCCATTCTGAAGACT
GATGAACCAATTTGCTCCGAAGGCAAGCTTGCTTGCGGAAGTGGTGACTGCATCGAGAAA
GAATTATTCTGTAACGGAAAACCAGACTGCAAAGATGAATCTGATGAAAATGCTTGCACC
GTCGATTTGGACCCTAATAGAGCACCAGACTGCGATACCAGCCAATGCAAACTTCCTGAT
TGCTTCTGCTCAGCTGATGGTACTCGTATCCCCGGAGGCTTGGAGCCTAGTCAAGTCCCT
CAGATGATCACAATCACCTTCAACGGTGCTGTAAACGTTGACAACATTGACTTGTACGAC
CAGATCTTCAATGGAAACCACCAAAATCCTAATGGTTGTCAGATCCGTGGTACATTCTTT
GTCTCCCACAAATATAGTAACTACGCTGCTATTCAGGAATTACACCGCAGGGGACACGAA
ATCGCAGTTTTCTCAATCACACATAAAGATGATCCTAACTATTGGACCAGTGGAAGCTAT
GACGATTGGTTAGCCGAAATGGCTGGAGCGCGTCTTATAATTGAACGTTTTGCGAACATT
AGCGATGCTTCCATTATTGGAGTAAGAGCCCCATACCTGAGAGTTGGAGGAAATAAACAA
TTTGAAATGATGACTGACCAATACTTTGTATATGATGCTTCTATAACCGCACCTCTAGGT
CGTGTCCCTATCTGGCCTTACACATTATTCTTCCGCATGCCACATAAGTGTAATGGAAAC
GCCCATAACTGTCCCTCAAGGAGTCACCCAGTCTGGGAAATGGTTATGAATGAACTTGAC
AGAAGAGATGACCCAACCTTTGATGAATCTCTTCCTGGTTGTCACGTGGTGGACTCTTGT
TCAAACATTCAAACTGGAGAACAATTCGCACGTCTTCTTCGTCACAACTTCAACCGTCAC
TACACGACCAACCGTGCCCCTCTTGGTTTCCATTTCCATGCTTCTTGGCTCAAGTCAAAG
AAAGAATTCAGAGATGAACTTATCAAATTTATCCAAGAAATGAATGAAAAGAACGATGTC
TACTTCACTTCTCTCATTCAGGTGATACAATGGATGCAGAACCCCACAGAACTGTCCCAA
CTCAGAGATTTTGCGGAATGGAAACAAGACAAATGTGACGTAAAAGGTCAACCATTCTGC
TCTCTACCAAATGCGTGTCCCTTAACGACCCGGGAACTGCCAGGCGAGACACTGCGTCTT
TTCACCTGTATGGAATGCCCTAATAACTACCCCTGGATTTTAGATCCCACGGGAGAGGGC
TTCAGCGTTAGGAAGTGA
Protein sequence:
MQQFVMKYNKKYILKAQDDDGDDEQNPEQLCDGRPGDEYFRLSTEGDCREVVRCDKGGEN
GVTRLASVRCPGGLAFDIDRQTCDWKTHVKNCDKLESLKQITCPSGLSFDLDKQTCDWKG
KVTNCDKIEKPRKILPILKTDEPICSEGKLACGSGDCIEKELFCNGKPDCKDESDENACT
VDLDPNRAPDCDTSQCKLPDCFCSADGTRIPGGLEPSQVPQMITITFNGAVNVDNIDLYD
QIFNGNHQNPNGCQIRGTFFVSHKYSNYAAIQELHRRGHEIAVFSITHKDDPNYWTSGSY
DDWLAEMAGARLIIERFANISDASIIGVRAPYLRVGGNKQFEMMTDQYFVYDASITAPLG
RVPIWPYTLFFRMPHKCNGNAHNCPSRSHPVWEMVMNELDRRDDPTFDESLPGCHVVDSC
SNIQTGEQFARLLRHNFNRHYTTNRAPLGFHFHASWLKSKKEFRDELIKFIQEMNEKNDV
YFTSLIQVIQWMQNPTELSQLRDFAEWKQDKCDVKGQPFCSLPNACPLTTRELPGETLRL
FTCMECPNNYPWILDPTGEGFSVRK