| New model in OGS2.0 | DPOGS214171 |
|---|---|
| Genomic Position | scaffold49:+ 120212-121804 |
| See gene structure | |
| CDS Length | 1593 |
| Paired RNAseq reads | 1343 |
| Single RNAseq reads | 3685 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006216 (0.0) |
| Best Drosophila hit | Alanyl-tRNA synthetase, isoform B (5e-151) |
| Best Human hit | alanyl-tRNA synthetase, cytoplasmic (4e-140) |
| Best NR hit (blastp) | alanyl-tRNA synthetase, cytoplasmic [Bombyx mori] (0.0) |
| Best NR hit (blastx) | alanyl-tRNA synthetase, cytoplasmic [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0006419 alanyl-tRNA aminoacylation GO:0004813 alanine-tRNA ligase activity GO:0005737 cytoplasm GO:0005524 ATP binding GO:0003676 nucleic acid binding |
| InterPro families | IPR000178 Translation initiation factor aIF-2, bacterial-like IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal IPR012947 Threonyl/alanyl tRNA synthetase, SAD IPR003156 Phosphoesterase, DHHA1 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain IPR018165 Alanyl-tRNA synthetase, class IIc, core domain |
| Orthology group | MCL12462 |
Nucleotide sequence:
ATGGATGCTTATGAAAAGGCGAAAAAAGAATCCCAACTGTCATCACAAGGTAAAACTGCT
GGACAGGAAGATTTGCTGGCTCTAGACATTCACGCCATAAGCCATTTACAAGAGACAGGT
GTTAACACAACAGACGATTCACCAAAATACAATTATACACCATCCTCGACAGATAAAGAT
GCTGAATATAAATTTGCTCCATGTGAAGGTGTTATTACAGCGCTGCGCAGAAATAAACAA
TTTGTAGATGAAGTAAGTTCTGGTCAAGAATGTGGTATTATACTAGATCGCACAAATTTT
TACGCTGAACAAGGAGGTCAAATATTCGACGAGGGTTACATGGTAAAGCTAGACGATGAA
AGCGTAGAATTCACAGTTAAAAGCGTTCAAGTTAAGGGAGGATATGTTCTTCATATTGGA
AAAGTTGAAGGAACTCTCAAAGTTGGAGATAGAGTTTCTCTCCATATCGACACTGAAAGG
AGGAGATTAGTGATGAATAATCATACAGGAACACACATTCTGAACAACGTGCTGAGGAAA
GTACTCGGAAATGATTCTGATCAACGTGGATCGCTCGTAATGCCGGACCGTCTGAGATTT
GACTTCACAAATAAAGGACCAATGACTGTGAAACAGATAAAAGATGCGGAAGATCAAATT
AAGGAAATAATAAACAAAAACAAAGTTGTATATGCTAAACATACCAGCTTAAGTGAAGCT
AAAAAAATTAAGGGCTTGCGTGCTATGTTTGATGAACAGTACCCTGATCCAGTAAGAGTG
GTTTCAGTTGGAATACCTGTTGAAGATTTGGAAAATAATCCCGATGGATTGTCTGGATTT
GAAACTTCCGTTGAATTTTGCGGTGGTTCTCATTTGCATCAAACCGGTCATATTGGTGAT
TACGTTATTGTAAGCGAAGAAGGTATAGCAAAAGGAATTCGGAGAATTGTAGCATTAACA
GGTCCCGAGGCTATCAAAGCCTTAAACAAAATGAGTTCTTTAGAAAACGAAGTAAATGCT
ATTGCAAATTTAATAAAGGAACAGGGTGAAAATGTTAATCAAAAAGAAGTTGTTAAAAAT
ATAGTAGACCTGACTAATGACGTATCTCATGCTCAAATAGCTTACTGGAAAAAAGAGGAA
CTAAGAACACTGCTGAAAAATCTAAAAAAACAATTGGACGATAAGGAAAGGGCTGCAAAG
GCGATGACAGCTAATATCGTTATAGAGAAGGCTAAAGAATTATGTTTAAAAGATGAAAAT
GCTATAGTTATTGTTGAAGAATTAAAGGCTTACAATAACACTAAGGCCCTGGATGGTGCT
TTGAAACAAGTCAAACAGATGTTACCGAACACCGCTGCTATGTTTTTCTCCGTTGACGAC
GATTCAAATAAAATCTTCTGTCTAGCTGCTGTGCCTAAGATTTTAAATGAAAAAGGTTTA
TTGGCGTCTGAATGGGTCCAATCAGTCGTGCCTGTGATGGGAGGTAAAGGTGGGGGAAAG
GCTGAATCCGCTCAGGCTTCTGGAAACAGTCCTAATAAACTACAGGATGCAATTAAAATT
GGTCGTGATTTTGCTAATTCCAAACTGTCGTAA
Protein sequence:
MDAYEKAKKESQLSSQGKTAGQEDLLALDIHAISHLQETGVNTTDDSPKYNYTPSSTDKD
AEYKFAPCEGVITALRRNKQFVDEVSSGQECGIILDRTNFYAEQGGQIFDEGYMVKLDDE
SVEFTVKSVQVKGGYVLHIGKVEGTLKVGDRVSLHIDTERRRLVMNNHTGTHILNNVLRK
VLGNDSDQRGSLVMPDRLRFDFTNKGPMTVKQIKDAEDQIKEIINKNKVVYAKHTSLSEA
KKIKGLRAMFDEQYPDPVRVVSVGIPVEDLENNPDGLSGFETSVEFCGGSHLHQTGHIGD
YVIVSEEGIAKGIRRIVALTGPEAIKALNKMSSLENEVNAIANLIKEQGENVNQKEVVKN
IVDLTNDVSHAQIAYWKKEELRTLLKNLKKQLDDKERAAKAMTANIVIEKAKELCLKDEN
AIVIVEELKAYNNTKALDGALKQVKQMLPNTAAMFFSVDDDSNKIFCLAAVPKILNEKGL
LASEWVQSVVPVMGGKGGGKAESAQASGNSPNKLQDAIKIGRDFANSKLS