| New model in OGS2.0 | DPOGS203693 |
|---|---|
| Genomic Position | scaffold969:+ 1388-8487 |
| See gene structure | |
| CDS Length | 2361 |
| Paired RNAseq reads | 252 |
| Single RNAseq reads | 635 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000351 (1e-32) |
| Best Drosophila hit | CG34347, isoform D (4e-62) |
| Best Human hit | band 4.1-like protein 4A (3e-41) |
| Best NR hit (blastp) | PREDICTED: similar to band 4.1-like protein 4A (NBL4 protein), putative [Tribolium castaneum] (5e-117) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC001763 [Tribolium castaneum] (3e-59) |
| GeneOntology terms | GO:0003779 actin binding GO:0008092 cytoskeletal protein binding GO:0005856 cytoskeleton |
| InterPro families | IPR019747 FERM conserved site IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle IPR011993 Pleckstrin homology-type IPR018980 FERM, C-terminal PH-like domain IPR019748 FERM central domain IPR000299 FERM domain |
| Orthology group | MCL15639 |
Nucleotide sequence:
ATGATCCCCGTCGACATACACTTGGCTACGTGTCAGAGTTTAGGCTGCTTGCTCATCAAA
CACCTGAATTCGAAGGAAGAGCTGCGGATATACACAGAACACTCACCGGAATTAGGTGAC
TATGATCCCCGTCGACATACACTTGGCTACGTGTCAGAATTTAGGCTGCTTGCTCATCAA
ACACCTGAATTCGAAGGAAGAGCTGCGGATATACACAGAACACTCACAGGTATATCACCA
GCACAAGCGGAACTTAGTTACTTAGATAAAGTGAAATGGCTTGACATGTATGGTGTTGAT
CTTCATCCTGTTCTGGGCGAAGACAGCGTTGAGTACTTCTTGGGACTAGCGCCAAGTGGC
CTGTTGCTCTTACGTGGAAAACATACAGTCGCTACCTATTACTGGCCGCGCGTATCAAAA
CTTTATTACAAAGGACGATATTTCATGATACGCGTAGCAGATAAAAATAATGACACGTCA
ACGTATGGTTTTGAATCCCCAACAAGAGCAGCCTGCCGGCATTTGTGGCGGTGTTGTTCT
GATCATCATACTTTCTTTCGCTTACAACAAACATCACCTGCATCAGCAGATATATTTGCG
TTAGGTTCAAGACTGAGAAATAGTAGTCGAGCTGCAAGACCACGTCCTCCGCCTGCGTTC
ACGCGAACACCCTCTCGAAGGATTTCCCGTCCACTAACATCTTATTCTTCGTTACACGAC
GTGCCAAAGTTAGAAGATTTGAGAATAAAAGACTGCCCTCCTGAAGTTAAACAGCCTTCC
TCAGTGCACCGCCCTAATTCTATAAGCGGTGAAGGCCCTTGTGAGACTGTTGGTCCCGGC
GGGTCACCTCGTTCAACTCGCTCGGCACCAACTCGACGTGGTCTATACTCGGCATCACCT
ACTACTCACAGGCCGCCACCAGTGCCAAGACACCGTTCAGCTTCAGTTGATTCTCAGAGT
TCTAACGACTCGAGGTCCAACCGCAAACATAGGCACCGCTCTCGACGACAGCAGTCAGAT
GCAGAGAGTGAACTGTCCCGTGGTTCCGGACGCTCTGGGCGCAGACATCGCCGACACCGC
TCTAGACACAAGCAGGAGTCCGGCTCAGAGAGAGATGATTCGCAACCAGACAACAAGGAA
TACGAGCTTGTCGACTCGGAATCTCAATGGAAGGAAGTATTAAGACAGACGTCAGCTGGA
GGCAGCGTGCAAGTGGCAAATGTTCGTCGTTCACAAATGGAACCGGAGACAGGAACGCAT
CGATCGTCACACAGACCACGACGACATAAAAAACATAGGTCAAGATCCCGTTCACCGAAC
GAAAAGAAGTGGCTACCAAATGAATTAAAGCAACACCTCGAATTCTCTCTAGTGGATACT
ACAGGAATGACTGAGGAACAGCTGAAGGAGATACCCTATACTGTTGTGCAAACGAGCCAG
GCTCGGCACACCAAACTAAGGACTTCATCTAAACACAGACAGACGGATCACGGTTCACTT
GCAAGACGGGAGAAGAGCTCTTCGTCACACAAAAGTGACCACGACAACCACAATCAAGGG
TCTCTCAGATCGATATCAAGCACACTCAGCACACATAGAACTACCAATGAAAAACATGGA
AGGCGTTTGTATCCAAACTATGATGATTCTGTTGGACGGATCGGTGAAGATTATTTAGCT
AACAATGGATATAAAACTTCAGTGACGCCATTACCGCATAATAACAATCCGTATAGTCCA
GTAACCAACAGCAATAGTAATAGTTCCAGCGGAGAATTGATAGGAAGCGCAAGGGTATCA
CACGAACATACAGATTCTGGATTAGGCGCTGACCAGGATTACGCGTATTCCTCTGAAAGA
TCCAGTGACAGTGCAAAATGCGGCGGTGGAAGTTCACAGGCCCCAGTGAGTAGGCAGTGG
CGTGTTGGTGGGGGGAGTATAGGGGGTGCGGGGTGCGGCGCGGGCGCATTAACCCGTCGG
CCGCCGGCCGCGCCGGGTCGCGCGCGTCTCTCCGTGTCCGGCAGCCAGAGGTCGCTGTTG
TCGGTCGCGAGTGACAGCGCCACGTCACGCCGCCCGCGCGACCTCGCGCCCCGCTGCTAT
CCAAGCCCTGCGGACGATGGCTTTTCTCTCTTCAGACATGCTAGCAACAACAACATAATG
GGCGAGAGCGGATCTCTGGCGCGGCGGTACGCACGTCCGTCGAGGGAGTCGCGCGACTAC
AATGCGAACATCGCGCGCACGCACTCTCGTCTCGCTCATGCGCACGCGCACATGCGACAT
GACAACACACTCGACATTATATTAAAACCCCTGATAGAAAGCACGCAAGCAACTAAGTTC
AGTGAAGGATGCTTCGAGTAG
Protein sequence:
MIPVDIHLATCQSLGCLLIKHLNSKEELRIYTEHSPELGDYDPRRHTLGYVSEFRLLAHQ
TPEFEGRAADIHRTLTGISPAQAELSYLDKVKWLDMYGVDLHPVLGEDSVEYFLGLAPSG
LLLLRGKHTVATYYWPRVSKLYYKGRYFMIRVADKNNDTSTYGFESPTRAACRHLWRCCS
DHHTFFRLQQTSPASADIFALGSRLRNSSRAARPRPPPAFTRTPSRRISRPLTSYSSLHD
VPKLEDLRIKDCPPEVKQPSSVHRPNSISGEGPCETVGPGGSPRSTRSAPTRRGLYSASP
TTHRPPPVPRHRSASVDSQSSNDSRSNRKHRHRSRRQQSDAESELSRGSGRSGRRHRRHR
SRHKQESGSERDDSQPDNKEYELVDSESQWKEVLRQTSAGGSVQVANVRRSQMEPETGTH
RSSHRPRRHKKHRSRSRSPNEKKWLPNELKQHLEFSLVDTTGMTEEQLKEIPYTVVQTSQ
ARHTKLRTSSKHRQTDHGSLARREKSSSSHKSDHDNHNQGSLRSISSTLSTHRTTNEKHG
RRLYPNYDDSVGRIGEDYLANNGYKTSVTPLPHNNNPYSPVTNSNSNSSSGELIGSARVS
HEHTDSGLGADQDYAYSSERSSDSAKCGGGSSQAPVSRQWRVGGGSIGGAGCGAGALTRR
PPAAPGRARLSVSGSQRSLLSVASDSATSRRPRDLAPRCYPSPADDGFSLFRHASNNNIM
GESGSLARRYARPSRESRDYNANIARTHSRLAHAHAHMRHDNTLDIILKPLIESTQATKF
SEGCFE