New model in OGS2.0 | DPOGS206581  |
---|---|
Genomic Position | scaffold3944:- 3149-8146 |
See gene structure | |
CDS Length | 1791 |
Paired RNAseq reads   | 211 |
Single RNAseq reads   | 555 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013742 (0.0) |
Best Drosophila hit   | PICK1, isoform A (4e-144) |
Best Human hit | PRKCA-binding protein (4e-130) |
Best NR hit (blastp)   | protein kinase C alpha binding protein [Spodoptera exigua] (0.0) |
Best NR hit (blastx)   | protein kinase C alpha binding protein [Spodoptera exigua] (0.0) |
GeneOntology terms   | GO:0005515 protein binding |
InterPro families    | IPR010504 Arfaptin-like IPR001478 PDZ/DHR/GLGF |
Orthology group | MCL13428 |
Nucleotide sequence:
ATGATGCAGGAATATGACGACGATTTCTTCTTTGAAGAGGACAAAATGGGAATGTTTGAC
AGAAGTCAATTAATGCCCTTCAATGATCCCAGGTTATACTTGCAAATCGCACCAAAGATG
TTCGAAGATAGACTCAAAACGAATCTGGCTAATTCAAAAAATTGTTTATCTCTAAACGTC
GACAGTGCAATTATAACCGATACAGAAGATGTTAAAGCCGAAAGTGATGCTATGCTGGAT
GAACTCAGCCCGGACCCGGATTGCATCTTCAATGATTTAAGACAAGAAAGATATTTGATA
CCAAATCAAAATCTTATGGGCATGACAGTTACATCTGGGAGTGTGGTGTTGAATAAGGAT
GAGAAGAATCTTATTGGCATAAGTATAGGCGGCGGGGCACCTTTATGTCCTTGCCTATAT
ATAGTACAGATTTTCGACAACACGCCGGCGTCAAAAGATGGAACACTTCAAAGCGGAGAC
GAGCTGGTGGGAGTTAATGGTCAGACAGTTAAGGGAAAGACTAAAGTTGAAGTTGCTAAA
ATGATACAATCGGCTAAGGACCAAGTGACCATAAACTACAACAAGCTCCACGCTGATCCG
AAGCAAGGCAAATCATTGGACATCATAATGAAGAAGATGAAACATAGATTGGTGGAAAAC
ATGTCGACTGGCACAGCAGATGCCTTGGGATTATCTCGAGCGATCCTCTGCAATGATACA
CTGGTGGCAAAACTCAATGAAATGCGTGAAACAGAGACCACATACAAAAGATTGGTGGAA
CATGCCAAAAGAATGCTGAAATCCTACTTCGATTTGCTTCAAACATACAAATCAATCGGC
GATATATTCGCCGCTATCGGTGTACGCGAGCCACAAGCGAGAGCATCTGAGGCATTCTCC
AAATTCGGCCACTGCCACCGACTCCTTGAACGCGATGGCATCAAAATGTTGAAAACATTG
AAACCGATTTTAGCTGACATGGGAACATATCTCCACAAAGCTATACCAGACACGAAGCTC
ACTATAAGGAAGTACGCGGACACCAAGTTTGAATACCTGTCGTACTGTTTGAAGGTCAAG
GAAATGGATGACGAGGAATATGGATATAACGCTTTACAGGAGCCCCTGTACAGAGTGGAA
ACGGGGAATTACGAATATAGATTAATTCTACGTTGCCGTCAAGAAGCAAGGGCTAGATTT
GCAAGACTGAGATCAGATGTACTTGTTAAGTTGGAGTTACTAGATAACAAAAAGACACAA
GACGTAGCCTATCAACTGAAGAGATTTATACACGGATTGGCTGTTTATCACAATGAGACA
GTTGAACATCTGAAAGAGAATGCGACTCTGTTTCCTGTGGAGGTAGATCTATCACAAAAT
GCCTTCCAATACAAATCTACTACACAACTTATACAAGATAACGAAGATGAAGATACAGAG
ATTGAATATGGCAAAGAGATTCAAGAATACCACGATGCATCAGACGACGATAAGGAAACA
AAAGTATTCAATAGACGTGAAACGAAAGACAAAGATGAGACGGATTCGTCAGAACAACTT
TTACCCTGTTTGACAGAAGACATGACCAACGTGAAACCTGACAGTGACGTTACAAATGTC
AAAACTGACAATGACAACCTCTCTCTTTTGACAGAATTAGGGTTGGCCGACACTCGTGAA
GATTTTGGAGACTTTCAAAATGGACTCTTTGATGATTTCATTCCAAAGCCAAATAAAGGG
ACTGACGACGTTTTCGATAAGTTACTCTGTGATCTTAATATTGGAAAATAA
Protein sequence:
MMQEYDDDFFFEEDKMGMFDRSQLMPFNDPRLYLQIAPKMFEDRLKTNLANSKNCLSLNV
DSAIITDTEDVKAESDAMLDELSPDPDCIFNDLRQERYLIPNQNLMGMTVTSGSVVLNKD
EKNLIGISIGGGAPLCPCLYIVQIFDNTPASKDGTLQSGDELVGVNGQTVKGKTKVEVAK
MIQSAKDQVTINYNKLHADPKQGKSLDIIMKKMKHRLVENMSTGTADALGLSRAILCNDT
LVAKLNEMRETETTYKRLVEHAKRMLKSYFDLLQTYKSIGDIFAAIGVREPQARASEAFS
KFGHCHRLLERDGIKMLKTLKPILADMGTYLHKAIPDTKLTIRKYADTKFEYLSYCLKVK
EMDDEEYGYNALQEPLYRVETGNYEYRLILRCRQEARARFARLRSDVLVKLELLDNKKTQ
DVAYQLKRFIHGLAVYHNETVEHLKENATLFPVEVDLSQNAFQYKSTTQLIQDNEDEDTE
IEYGKEIQEYHDASDDDKETKVFNRRETKDKDETDSSEQLLPCLTEDMTNVKPDSDVTNV
KTDNDNLSLLTELGLADTREDFGDFQNGLFDDFIPKPNKGTDDVFDKLLCDLNIGK