New model in OGS2.0 | DPOGS212017  |
---|---|
Genomic Position | scaffold1491:+ 109-556 |
See gene structure | |
CDS Length | 324 |
Paired RNAseq reads   | 55 |
Single RNAseq reads   | 181 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010171 (2e-48) |
Best Drosophila hit   | CG5205 (2e-20) |
Best Human hit | activating signal cointegrator 1 complex subunit 3 isoform a (5e-18) |
Best NR hit (blastp)   | activating signal cointegrator 1 complex subunit 3, helc1 [Aedes aegypti] (3e-20) |
Best NR hit (blastx)   | AGAP001234-PA [Anopheles gambiae str. PEST] (4e-19) |
GeneOntology terms    | GO:0003724 RNA helicase activity GO:0004386 helicase activity GO:0005682 U5 snRNP GO:0000398 nuclear mRNA splicing, via spliceosome GO:0030532 small nuclear ribonucleoprotein complex GO:0003676 nucleic acid binding GO:0005524 ATP binding GO:0008026 ATP-dependent helicase activity |
InterPro families   | IPR004179 Sec63 domain |
Orthology group | ND |
Nucleotide sequence:
ATGCAAAGACGTGGTGGTAACCCAAATAACGTCTTATGTCCGCGTTTCCCCCGGGGTAAG
AATGAGGGCTGGTTCATCACCCTGGGGTCTATAGAAAATGGAGAGCTACAAGCTTTAAAA
CGCGTTCCGCCTAAGGGTACATCAAATGTTACTTTCTACACACCATCGCAAAATGGACGC
ATAATATACACAATGTATGTAATGAGTGACAGTTACATGGGTCTAGATCAACAGTATGAC
TTACAATTTGACATCATTGGCCCTTTACCCACAGAGACGGTTGACAGAGTATACGATACC
ATAGACAAAGTTATCATTGAATGA
Protein sequence:
MQRRGGNPNNVLCPRFPRGKNEGWFITLGSIENGELQALKRVPPKGTSNVTFYTPSQNGR
IIYTMYVMSDSYMGLDQQYDLQFDIIGPLPTETVDRVYDTIDKVIIE