| New model in OGS2.0 | DPOGS212018 |
|---|---|
| Genomic Position | scaffold1491:+ 7322-9305 |
| See gene structure | |
| CDS Length | 783 |
| Paired RNAseq reads | 32 |
| Single RNAseq reads | 123 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010172 (3e-13) |
| Best Drosophila hit | ND |
| Best Human hit | nuclear RNA export factor 2 (3e-09) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC008131 [Tribolium castaneum] (2e-13) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC008131 [Tribolium castaneum] (3e-14) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0003723 RNA binding GO:0003729 mRNA binding GO:0005487 nucleocytoplasmic transporter activity GO:0005515 protein binding GO:0005622 intracellular GO:0005634 nucleus GO:0005643 nuclear pore GO:0005654 nucleoplasm GO:0005737 cytoplasm GO:0006405 RNA export from nucleus GO:0006406 mRNA export from nucleus GO:0006810 transport GO:0016607 nuclear speck GO:0016973 poly(A)+ mRNA export from nucleus GO:0042405 nuclear inclusion body |
| InterPro families | IPR001611 Leucine-rich repeat |
| Orthology group | ND |
Nucleotide sequence:
ATGGGTAAAGATACAAAATTGCTGAATTTAAGCAACAATGGATTAAATCACATCCCATTG
GACATATTAAATTTCTTCATTAAAGGTGATCTAACCGGGGTTAATCTGAGTAATAACAAT
ATACCTTCAATTTACGAACTTCAAAGGGTGAGCAGCAAAATTGAAAAGTTATGGATAGAA
GGCAATCCCTTGTGCGATGAAATGGATTTAAATTTGTACATCAAACAGATACTACAAAAA
TTTCCTCGATTAACAGAACTGGATGGTGTGAAAATTAATAATTTTGGAATAATGTTTCCA
TTTTACAAAAGCTATATGGAAAATCCGAACAAGAAGACAATGGCTGTGATTGAGAACTTT
GTTTCATTGTACTTTGCTCATTACGACACAAATCCAAGGAAAAAAATTGACATGTTCTAT
GAACCCAATGCTCAATTCACATTATCAACATCTTTTACAACATATGAGATGTTTTCAGTG
TCTTTTGCATCACCGGAGAAAATAAAAAATAGTTTTCTGACTCCCGTCAGACATTTGAAT
CAGTTGAGCCTGATTGATCCAGAGAAAGAAGACAAAGATATAATTTGTGGAGCATTCACT
CATATAACGCAATTGAAAAAGTCTGAAGCGGAAACACGTTTGAAAAACCACAGCTGGGAT
TTAAAAAGAGCTTTGTCAGAATTCGCTTCTGAATACAAAAATGATTTTCTTAAGGAGGAA
AGTTTTATGAAGGCTGATTTGTCTGACTTGTCATCCGTTCTTGATGTTGACGAGATTGAT
TAA
Protein sequence:
MGKDTKLLNLSNNGLNHIPLDILNFFIKGDLTGVNLSNNNIPSIYELQRVSSKIEKLWIE
GNPLCDEMDLNLYIKQILQKFPRLTELDGVKINNFGIMFPFYKSYMENPNKKTMAVIENF
VSLYFAHYDTNPRKKIDMFYEPNAQFTLSTSFTTYEMFSVSFASPEKIKNSFLTPVRHLN
QLSLIDPEKEDKDIICGAFTHITQLKKSEAETRLKNHSWDLKRALSEFASEYKNDFLKEE
SFMKADLSDLSSVLDVDEID