| New model in OGS2.0 | DPOGS212019 |
|---|---|
| Genomic Position | scaffold1491:+ 9749-11612 |
| See gene structure | |
| CDS Length | 513 |
| Paired RNAseq reads | 385 |
| Single RNAseq reads | 1539 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010172 (1e-56) |
| Best Drosophila hit | TBP-associated factor 12, isoform D (4e-45) |
| Best Human hit | transcription initiation factor TFIID subunit 12 (1e-42) |
| Best NR hit (blastp) | transcription initiation factor TFIID subunit 12 [Bombyx mori] (2e-77) |
| Best NR hit (blastx) | transcription initiation factor TFIID subunit 12 [Bombyx mori] (4e-74) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0005634 nucleus GO:0016251 general RNA polymerase II transcription factor activity GO:0005669 transcription factor TFIID complex GO:0006367 transcription initiation from RNA polymerase II promoter GO:0003677 DNA binding GO:0016986 transcription initiation factor activity |
| InterPro families | IPR009072 Histone-fold IPR003228 Transcription initiation factor TFIID |
| Orthology group | MCL14106 |
Nucleotide sequence:
ATGACGATGCAAGCTCCAAACATGCCAACGATGGGATCTCTGAACCAGGGGATCCAGTAT
GCTAATAATCCGATCCAAAGCCCTCAGCTTCAAACGTCACTGCAAGGCTCGCCCTCGCAA
CATAGCCCTATGGGAATGCAATCACAAACAGCACCTAAACTAAACCAAGGAGGTGGCGAT
CAAACGTCACAACTTCTCAGTCGTCCAAGACTTCAAGAGCTGGTCCGGGAAATCGACCCT
ACTATGCAGCTTGATGAAGAAGTAGAGGAAATATTACTGCAATTAGCCGATGACTTCATT
GACACATCACTATCTTCATCTTGCGCTCTAGCTAAACACAGACATTCATCGAATGTGGAA
CTTAAAGATGTTCAACTACATTTAGAACGACAATGGAATATGTGGATTCCAGGTTTTGGA
AATGATGAACTAAGGCCTTATAAACGAGCAGCAGTTACGGAAGCACACAAACAGAGAATG
GCTCTCATTAGAAAGACTATTAAAAAATATTAA
Protein sequence:
MTMQAPNMPTMGSLNQGIQYANNPIQSPQLQTSLQGSPSQHSPMGMQSQTAPKLNQGGGD
QTSQLLSRPRLQELVREIDPTMQLDEEVEEILLQLADDFIDTSLSSSCALAKHRHSSNVE
LKDVQLHLERQWNMWIPGFGNDELRPYKRAAVTEAHKQRMALIRKTIKKY