| New model in OGS2.0 | DPOGS215787 |
|---|---|
| Genomic Position | scaffold6221:+ 9360-12236 |
| See gene structure | |
| CDS Length | 1584 |
| Paired RNAseq reads | 1165 |
| Single RNAseq reads | 3229 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003507 (3e-125) |
| Best Drosophila hit | CG2145 (1e-73) |
| Best Human hit | poly(U)-specific endoribonuclease isoform 2 precursor (1e-39) |
| Best NR hit (blastp) | PREDICTED: similar to CG2145-PA [Nasonia vitripennis] (2e-85) |
| Best NR hit (blastx) | GG18381 [Drosophila erecta] (1e-83) |
| GeneOntology terms | GO:0008236 serine-type peptidase activity |
| InterPro families | IPR018998 Endoribonuclease XendoU |
| Orthology group | MCL17432 |
Nucleotide sequence:
ATGATTAGAAATGTTAAAAAGTCAAGGGTATCGGGTTTTAACAAAGTACAAAGATATAAT
CCAAGTAGCGACTTTTTACTTCACGAAGCTGGTGTTCCAGCACCGGACTTTAAAAATAAC
TATGCATCCCAATTTCCCAGTTTACCATCAGCAAAACCTTCTGTACCTACCAGTCCTACA
AATAATTTAGTGACTACCGCAAAACCACAACAAACTGGTAAAAGAGACTATGTAGCAACG
CAAATATCCACCAAAAACCCAGCGACGGCAGTAACGACACCCAAGACACAACTAAGCACC
GCGGTTACCCCAAATCCATCCAGACGAGACTATGTAGCTCCGCAATTCCCTACTGCCAAA
CCACTCACAACCCAAAAACAGTACTCTAATTCACCTACTGTGGTGACACAAAAAACACCT
TCTCCAAAAAGAGATTATGTTGCACCAAATTTACCCAAAGACAATCGTCAAACACCTGGA
AAGGTAAAGGACCTTATAAACTTTTATGACAGTAAATCACAGGGTGTCTCCACACCAACT
AGGAGTCCCAGTTACAGTTCAGTTTTAGGAGGAAAGGGAACCCAATCCACAATATTAACA
AATCCCACGCCAAAGCCTATGAGTTTTAGTTCTGTAGTCTCAGGACCGAAGAAACCGAGT
ACTGGACCATCGAGTTCGTCCACTTTAACACCGACTAGCCCATCTAAACCAGCGCCAACT
AATTTGCCAACAAATGTCGTTTTACCTAGCTCGTTATCTAACAACCAAGGCCCTAATTCG
AATAGCCTAACCGATGTAGAGTTACAGAATGTTAGCGAGGAATTATTGCGAAAAGATGTT
AATAATGCAGCAAAGTACATTACGATCTCGTATCAGGAGAAGACCACGTCCATGTCAAAA
GATGATAAATCTCCTTTGCCATTACTCACCATTACACCTGACGCGTGGAAAATATCGACG
ATAGAGAAATTTATACCGCTATTAGATAATTACGAAAGAGATACCCTTGTCAATGAATAT
GTTACACCGCAGGAACGAAACGAAGAAAACGCTTTTATGGATGCTATTATGACCACGAGT
GTTATTCGGCATCTAATGACCTTCTTGAAGGACAAAGGTTATGTTTCACCCGATCCAAAG
CTGCAAAGAGATTTTCTAAAACAGATATGGTTTGGATTATATTCAAGAGGTAAAGGTAAA
ATCAGCAGTTCAGGATTCGAACATATTTTTGTTTCTGAACTTAAAAATGGAGAAGTGTCA
GGACTCCACAATTGGATATACTTTTCAAGAGAGGAAGTGGCAAACCGTGTTAACTATCTA
GGTTACTTGAAAAATCTTCAATTAAGTGATAAGGGAGCCATTATTAAAATGCATTTCAAT
CAACAAGGGGTTGATAAACCTGTGGATACAATGTTTATTGGCACTTCGCCTGAATTAGAA
ATGGCGTTGTATACTCTGTGCTACGTCACAAGAGTCGATAAAGATTGCAATCTTAAATTG
GGAACAAAAGATGTGAATATAGTAACTCATAACTACAGATACCGTAGTAAGAATTACATT
GGAAGTGCTTACCCTCAAATATAA
Protein sequence:
MIRNVKKSRVSGFNKVQRYNPSSDFLLHEAGVPAPDFKNNYASQFPSLPSAKPSVPTSPT
NNLVTTAKPQQTGKRDYVATQISTKNPATAVTTPKTQLSTAVTPNPSRRDYVAPQFPTAK
PLTTQKQYSNSPTVVTQKTPSPKRDYVAPNLPKDNRQTPGKVKDLINFYDSKSQGVSTPT
RSPSYSSVLGGKGTQSTILTNPTPKPMSFSSVVSGPKKPSTGPSSSSTLTPTSPSKPAPT
NLPTNVVLPSSLSNNQGPNSNSLTDVELQNVSEELLRKDVNNAAKYITISYQEKTTSMSK
DDKSPLPLLTITPDAWKISTIEKFIPLLDNYERDTLVNEYVTPQERNEENAFMDAIMTTS
VIRHLMTFLKDKGYVSPDPKLQRDFLKQIWFGLYSRGKGKISSSGFEHIFVSELKNGEVS
GLHNWIYFSREEVANRVNYLGYLKNLQLSDKGAIIKMHFNQQGVDKPVDTMFIGTSPELE
MALYTLCYVTRVDKDCNLKLGTKDVNIVTHNYRYRSKNYIGSAYPQI