New model in OGS2.0 | DPOGS205020  |
---|---|
Genomic Position | scaffold5004:- 15-4118 |
See gene structure | |
CDS Length | 942 |
Paired RNAseq reads   | 270 |
Single RNAseq reads   | 656 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001789 (4e-97) |
Best Drosophila hit   | pineapple eye (7e-29) |
Best Human hit | PHD finger protein 7 isoform 1 (8e-41) |
Best NR hit (blastp)   | PREDICTED: similar to PHD finger protein 7, partial [Apis mellifera] (1e-55) |
Best NR hit (blastx)   | PREDICTED: similar to Probable E3 ubiquitin-protein ligase KIAA1333 homolog [Nasonia vitripennis] (4e-58) |
GeneOntology terms    | GO:0005737 cytoplasm GO:0005634 nucleus GO:0006915 apoptosis GO:0046872 metal ion binding GO:0016874 ligase activity GO:0007275 multicellular organismal development GO:0016881 acid-amino acid ligase activity GO:0008270 zinc ion binding GO:0005515 protein binding GO:0006464 protein modification process GO:0005622 intracellular GO:0001824 blastocyst development GO:0043066 negative regulation of apoptosis GO:0000209 protein polyubiquitination GO:0004842 ubiquitin-protein ligase activity GO:0005575 cellular_component |
InterPro families   | IPR013083 Zinc finger, RING/FYVE/PHD-type |
Orthology group | MCL11473 |
Nucleotide sequence:
ATGGCCTACCGAAGAGGGTCAACATCGAGAAAACATTTGCTAGCAAAAATCGCAGAAAAA
AGTGTCCCTTGTGCGTTTTGTAGGCTCGAAGTTGATGATGAGGCTATTTACGGCAAATTA
TACAGCATTGGAGACATCCATTGTCATTATTTCTGTGTGTTGCTATCCTGTTGTTTGATA
CAAAAGGGTAAAGACAGCGAAGGGCTGTTCGGTTTCCTCTATCAGGATATATTGGCAGAG
ATAGAGAGAAGCAAAAAACATAAATGCTCGTATTGTTATAAAGAGGGCGCGACTTTGGGT
TGCTGCGTGTCTCAGTGCAGGAAGCAATTCCATTTGCCTTGCGGAAGGGAAAGAAATGTG
GTCTCCTTGTTCTACGGGAATTTTAAATCATTTTGTGAAAAACATGCACCAAAACAAAAT
ATACCACCGGCTATTATGGAGAAGGCAAAGATAAGGAAATCCATAACGAGGAAGATTGAA
AATGGAGAATCTATTGACACGGATTCAGTTGCTGAGACGACGTGTGTTATATGTTACGAG
TGCGTCGATGGCTTCCCTACGCCGAGTACATTCTGGCCTCCCTGCTGTGCTATCGACGCT
TGGTTTCATAGAGATTGTATACAGCGCATGTCCCTGAGCGCTGGCATACATTACTTGAAG
TGTCCGCTGTGTAATGACAAAGAGGATTTCTACCAGGCTGTCTTGAACCAGGGATATTAT
GTTCCGGACAGAGATGCCGCTTGGGAGCTGGAACAGAACGCCTTCTCAGAAATATATGAG
CGGCAATTGTCGTGCTCCGCTGAGTCCCTGGGATATAAAGATGTGCCTGCTGTGCGGCTG
GCAGGGCGTCCACGCGTTCTGTGGCGGGAAGCTGTGGCTGTGTCCCGTGTGTGCGCCCTC
AGCACCGGACGCGGACGTGCTGCGGGACATCGAAAAACGTGA
Protein sequence:
MAYRRGSTSRKHLLAKIAEKSVPCAFCRLEVDDEAIYGKLYSIGDIHCHYFCVLLSCCLI
QKGKDSEGLFGFLYQDILAEIERSKKHKCSYCYKEGATLGCCVSQCRKQFHLPCGRERNV
VSLFYGNFKSFCEKHAPKQNIPPAIMEKAKIRKSITRKIENGESIDTDSVAETTCVICYE
CVDGFPTPSTFWPPCCAIDAWFHRDCIQRMSLSAGIHYLKCPLCNDKEDFYQAVLNQGYY
VPDRDAAWELEQNAFSEIYERQLSCSAESLGYKDVPAVRLAGRPRVLWREAVAVSRVCAL
STGRGRAAGHRKT