| New model in OGS2.0 | DPOGS212685 |
|---|---|
| Genomic Position | scaffold3:- 956035-960222 |
| See gene structure | |
| CDS Length | 831 |
| Paired RNAseq reads | 597 |
| Single RNAseq reads | 1677 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013191 (1e-37) |
| Best Drosophila hit | sarcoplasmic calcium-binding protein, isoform A (6e-61) |
| Best Human hit | ND |
| Best NR hit (blastp) | AGAP001177-PA [Anopheles gambiae str. PEST] (3e-73) |
| Best NR hit (blastx) | AGAP001177-PA [Anopheles gambiae str. PEST] (2e-75) |
| GeneOntology terms | GO:0016529 sarcoplasmic reticulum GO:0005509 calcium ion binding |
| InterPro families | IPR018249 EF-HAND 2 IPR018248 EF-hand IPR018247 EF-Hand 1, calcium-binding site IPR002048 Calcium-binding EF-hand IPR011992 EF-hand-like domain |
| Orthology group | MCL17965 |
Nucleotide sequence:
ATGGCGACATTTATGAGACTGGGATTTAAATCAGCCGCTTTGAGCTTGGAGAGAAATGCG
GCAGTATTTTCAAACTCTTCCGTCCAAAATTATGTAAAGTTGATACATACGAAGGTGTCG
TGCAATGGAAAGGTGTGCTATTTGCAAACGTTCCAAGACCAGAGAGATCTGGATGTAGAC
CGATCTGGTATGAAGAGGAGGTACAGCAAGCAGCACGGCAGGCCGGAGCGAGACAGGAGG
AAAAACTACAGCGACAGTGACTCCGACTCAGATACTGAGTGCAAGGGATACGATCGCTCG
GAGTTCTGGCGTAGGAAAATGCGTACAGTACATAACATCCTTGACGTTAACAAGGATGGA
TTGATCTCATTCAGCGACTTCCAGCTCCTATCGGAGAGATTCAAGTCCTTAGGACATTTA
GATGATAAACAGGCTAAAGAATTTACTGACATTATAAAGTTGACTTGGGAGGAACAATGG
GGACCCATAGACCCCTACAATTTCGTAACTGTCGAGCAATACTTAGAAGACATGCATCAC
GTGCTCAATGATAAGACGCAAAAGAAAAGAGCTCATCGCTGGCTGCCATATTTGTTTAAG
GCGGTCGACAAAGACAAATCCGGTTTCATATCAGTGAATGAGTTCAAACTGTTTTTTAAA
TGTCTCGGCCTAACGAACGAGCACGCTGCAGTTGCGTTCGCAGTAATCGACATTAATGGG
GATGGCAAGCTGTCTATGAAGGAGTTCGTTAATCTCGGAAAAGATTTCTTCTACACCGAG
GATGAATCCCGAGTGTCAAAAATGTTTTGGGGCCCATTGTCCGAAATATGA
Protein sequence:
MATFMRLGFKSAALSLERNAAVFSNSSVQNYVKLIHTKVSCNGKVCYLQTFQDQRDLDVD
RSGMKRRYSKQHGRPERDRRKNYSDSDSDSDTECKGYDRSEFWRRKMRTVHNILDVNKDG
LISFSDFQLLSERFKSLGHLDDKQAKEFTDIIKLTWEEQWGPIDPYNFVTVEQYLEDMHH
VLNDKTQKKRAHRWLPYLFKAVDKDKSGFISVNEFKLFFKCLGLTNEHAAVAFAVIDING
DGKLSMKEFVNLGKDFFYTEDESRVSKMFWGPLSEI