| New model in OGS2.0 | DPOGS212694 |
|---|---|
| Genomic Position | scaffold3:- 533011-556772 |
| See gene structure | |
| CDS Length | 1506 |
| Paired RNAseq reads | 50 |
| Single RNAseq reads | 155 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013129 (1e-75) |
| Best Drosophila hit | CG31148 (9e-64) |
| Best Human hit | glucosylceramidase isoform 1 precursor (1e-82) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010035 [Tribolium castaneum] (5e-94) |
| Best NR hit (blastx) | PREDICTED: similar to putative lysosomal glucocerebrosidase [Tribolium castaneum] (2e-92) |
| GeneOntology terms | GO:0043169 cation binding GO:0006629 lipid metabolic process GO:0005765 lysosomal membrane GO:0016798 hydrolase activity, acting on glycosyl bonds GO:0004348 glucosylceramidase activity GO:0005515 protein binding GO:0007040 lysosome organization GO:0008219 cell death GO:0006665 sphingolipid metabolic process GO:0005975 carbohydrate metabolic process GO:0016020 membrane |
| InterPro families | IPR017853 Glycoside hydrolase, superfamily IPR001139 Glycoside hydrolase, family 30 IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR013780 Glycosyl hydrolase, family 13, all-beta |
| Orthology group | MCL10212 |
Nucleotide sequence:
ATGACTACTTTGAGCTGGCTGCTACACGATGCTGCAGACGTTCTTGAGGTCGGGGTCGTC
GGCGGGCGGGGGTGGAGGGGGGCGGAAGGCAAAAGATTTTATAAACAGATTAATGATATC
CAGAGCCGGGACCCGTCAGTGAGCGACGATGAAGGAAATGTTTTCCTACTTGATCCGACG
ATTCGTTATCAGAATATCGAGGGTTTTGGCGGCGCTGTCACGGACTCGGCTGGTATAAAC
TTGAAGAGCTTACCTTTAGCAGCGCAACGGAAATTAATTAATTCCTATTTCAGTGATGTA
GGTATAGAATACAACATGCTCCGTCTGCCGATCGCCTCAACGGATTTTTCGACACGTATC
TACTCTTACGATGATTATCGTAACGATACAGATCTAGACAATTTTAAATTAGCTAAAGAA
GACTATGAATATAAGATTCCTTTCATTCAACATGCTAAAGATGTCGCCACTGACGATATT
CATATAGTCGCGGCATCATGGTCACCACCTAAATGGATGAAGACTAAAGACAGCATGGTC
GCAGGAGGTTCCGTAAAACATCGGTTCATGCAGGACTACGCTGAATATCATTGCAAATTT
GCAGAGGCTTACAAGAAGAATGGCATTGATATCTGGGCTATGTCAACATCAAACGAACCA
ACGTCCCCTCTGCTGAGGACTCCTTTCCAAAGCACGTTGTGGTATGTGCCGGATATGGGT
GCCTTCATTTCGAAGTATCTTGGACCAACATTAAGGAATTGTTCCGCGGAAGGAATTAAG
TTACTCACTATTGACGACCAACGTGGCTTAATTCCACTGTTCTCTGCGTTGTTTTCAATT
ATAGCGCCGGAAGCTATTGAATACGTAGACGGTTTCGCTCTGCATTCATATTTTAATAAA
ATAACCCCACCCTCTATGTCAACATTCCTCCTGAAACAGTTTCCAGATAAATTTGCTCTG
GTGACTGAATATTGTGCAGGATCTTCGCCGTCCGACAAACCGAAAGTAGATTTGGGTTCC
TGGGCGAGAGCTAAAGACTACGTCCAAGATATTCTAGAGAATCTCAACAGCAATTTTGTC
GGTTGGGTGGATTGGAACTTATGTTTGAACAGACAAGGCGGTCCGACCTGGGTCGGGAAC
TTCGTAGACTCCCCGATCATAGTTGACGCTAAAAAGCAAGAGTTCTACAAACAGCCCATG
TTCTATGCCATGGGACATTTTTCTAAATTCCTACCGAGAGGATCACAAAGAATACAAATG
TCTGCTGGTGCCGATAACCAATGTGACAAGTGCGTTAAGGATCCGTCCAAAGAATACATT
GCCTTCATGACGCCCGAAGACACAATTGTGGTCATAATATATAATGACGGGGAAGCACGC
GAGGCGACATTACGAGTGGGCACTTGTGACGTCATCACCCAACTCGATGCAAATTCCATA
ACAACCATCGAAATACCGACCACACAAGACGATGGAAACATGGACTGTAAAATCGTAGTG
GACTAA
Protein sequence:
MTTLSWLLHDAADVLEVGVVGGRGWRGAEGKRFYKQINDIQSRDPSVSDDEGNVFLLDPT
IRYQNIEGFGGAVTDSAGINLKSLPLAAQRKLINSYFSDVGIEYNMLRLPIASTDFSTRI
YSYDDYRNDTDLDNFKLAKEDYEYKIPFIQHAKDVATDDIHIVAASWSPPKWMKTKDSMV
AGGSVKHRFMQDYAEYHCKFAEAYKKNGIDIWAMSTSNEPTSPLLRTPFQSTLWYVPDMG
AFISKYLGPTLRNCSAEGIKLLTIDDQRGLIPLFSALFSIIAPEAIEYVDGFALHSYFNK
ITPPSMSTFLLKQFPDKFALVTEYCAGSSPSDKPKVDLGSWARAKDYVQDILENLNSNFV
GWVDWNLCLNRQGGPTWVGNFVDSPIIVDAKKQEFYKQPMFYAMGHFSKFLPRGSQRIQM
SAGADNQCDKCVKDPSKEYIAFMTPEDTIVVIIYNDGEAREATLRVGTCDVITQLDANSI
TTIEIPTTQDDGNMDCKIVVD