New model in OGS2.0 | DPOGS212697  |
---|---|
Genomic Position | scaffold3:- 503306-505766 |
See gene structure | |
CDS Length | 741 |
Paired RNAseq reads   | 172 |
Single RNAseq reads   | 366 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005248 (7e-27) |
Best Drosophila hit   | CG40485, isoform B (2e-30) |
Best Human hit | dehydrogenase/reductase SDR family member 11 precursor (7e-22) |
Best NR hit (blastp)   | AGAP005503-PA [Anopheles gambiae str. PEST] (2e-53) |
Best NR hit (blastx)   | NADP+-dependent farnesol dehydrogenase 1 [Aedes aegypti] (5e-37) |
GeneOntology terms   | GO:0016491 oxidoreductase activity |
InterPro families    | IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain IPR002347 Glucose/ribitol dehydrogenase |
Orthology group | MCL10062 |
Nucleotide sequence:
ATGGAGCGTTGGGTGGGAAAAACGGCGGTGGTGACGGGAGCTAGCTCTGGAATTGGTGCT
GCTGCGGCGGTGGCCTTAGCTGATCTCGGATTGAATGTCGTTGGACTCGCCAGGAGGGAT
CAGCTGGTGCAAGAATTAAACGCGAACGTGTCAGGTAGTGGAGAAATTTATTCACGAAGA
TGCGACATTGGAAACCTTGAAGATATATCAGCAGCCTTTGAATGGGTGGAAGAATTCCAC
GGCGGTACGGATATACTTATCAACAATGCTGGAATCTTCAAAGCGGGCCGAATAACAGGT
GCTGGTGATATGACCTTGTCTGATGAGGAACTGCTCGCGATCATGAACGTTAACTTTAAG
GGCGTGGTGATGTGCGCCAAGAAAGCCGTCTCCTCCATGTTGAAGAGAGGCTTCCATGGG
CATATTATTAACGTTTCCAGCCTGGCTGGTCAGTACATACCGTTCAGTTCCTACTTCAAC
GTGTACTCTTGCACCAAGCACGCGGCCACCGCCTTCTCGTCATCGCTGAATAACGAGCTG
GCCGACTGTAACAGTCAGATTAAACTGACGAACCTATCCCCCGGTCTCGTCCGCACTGAG
CTGACCGAAGCGCGACCCTTAGACGAGCCTATGTTGGACCCCAAAGAGGTCGCCAATGTC
ATCGTTTACGTCCTCTCGACGCCTCCGAACGTTAACATCTACGAGTTGGGTTTGACGACG
ACGGGCGAGAAGCGGCTTTGA
Protein sequence:
MERWVGKTAVVTGASSGIGAAAAVALADLGLNVVGLARRDQLVQELNANVSGSGEIYSRR
CDIGNLEDISAAFEWVEEFHGGTDILINNAGIFKAGRITGAGDMTLSDEELLAIMNVNFK
GVVMCAKKAVSSMLKRGFHGHIINVSSLAGQYIPFSSYFNVYSCTKHAATAFSSSLNNEL
ADCNSQIKLTNLSPGLVRTELTEARPLDEPMLDPKEVANVIVYVLSTPPNVNIYELGLTT
TGEKRL