| New model in OGS2.0 | DPOGS212699 |
|---|---|
| Genomic Position | scaffold3:- 478927-481542 |
| See gene structure | |
| CDS Length | 720 |
| Paired RNAseq reads | 108 |
| Single RNAseq reads | 312 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013124 (2e-16) |
| Best Drosophila hit | CG17359 (1e-15) |
| Best Human hit | zinc finger and BTB domain-containing protein 17 (2e-14) |
| Best NR hit (blastp) | GA18174 [Drosophila pseudoobscura pseudoobscura] (8e-16) |
| Best NR hit (blastx) | PREDICTED: similar to novel KRAB box and zinc finger, C2H2 type domain containing protein [Tribolium castaneum] (2e-19) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0005634 nucleus GO:0008270 zinc ion binding |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL40813 |
Nucleotide sequence:
ATGGAAGAAAAAAGGAAAAATAAATTATTCGACATATGTAGACTGTGTTTAGTGAAACGT
GGATTTTGTGATATTACTGACAGAAACGAATTGTGCGATAATATTCACAAATTCACCGGT
CTCAAGATATCCGCGTCGGACAAATTGCCTCAGAAAATTTGCAGAAATTGTTTAGACATA
GTAAATAAAGCATCAGAATTAAGAAACATGGCTAGGAAGAATGATAAACATTTAAGATCT
TTATTTGATTGCCCCGTGGAAGATCCGGTACCGGAATTTGAAGCGGGATCATCAAGTGAG
AAGAGTGAAATTGTTTTACAAGAGACGGAAAGAAAATGCTTCTCCCTAGCCGTCAGGCAA
GACCTGTTTAACAAATCCAAAACAAATGATGAAGAAGATAGCGAAGCTGTTAATTCTCTG
AATCTCATCCACTCAATGAAGCCCGAAAATGAGGACACGGACAGTGAATATAAATGTCCG
GTCTGCTCGAAGAATTTTGCAAAATGGAGGAAACTGTACGTACACCATCGCTTGCACAAT
AAATGTTACAAGTGTCCGATTGATATATGCGTAAAGAGGTTTGCTACAAAAGGAGATCTT
GAGAAACATATACGAACACACACGGGAGAAAAGCCTTATGTCTGTAATGAATGTGAGAAA
CGTTTTGCTCAGCGCGGGACATTGAAGGCTCATAAAGAATCCGTGCACCCTGTAACCTGA
Protein sequence:
MEEKRKNKLFDICRLCLVKRGFCDITDRNELCDNIHKFTGLKISASDKLPQKICRNCLDI
VNKASELRNMARKNDKHLRSLFDCPVEDPVPEFEAGSSSEKSEIVLQETERKCFSLAVRQ
DLFNKSKTNDEEDSEAVNSLNLIHSMKPENEDTDSEYKCPVCSKNFAKWRKLYVHHRLHN
KCYKCPIDICVKRFATKGDLEKHIRTHTGEKPYVCNECEKRFAQRGTLKAHKESVHPVT